Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMPCBO75439 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
PMPCBO75439 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMPCBO75439 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMPCBO75439 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMPCBO75439 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMPCBO75439 KRT16P1-201ENST00000399124 1418 ntBASIC19.42■□□□□ 0.7
PMPCBO75439 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PMPCBO75439 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 KRT8P41-201ENST00000533985 1514 ntBASIC19.41■□□□□ 0.7
PMPCBO75439 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.41■□□□□ 0.7
PMPCBO75439 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 AC004980.1-204ENST00000429707 299 ntBASIC19.41■□□□□ 0.7
PMPCBO75439 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.41■□□□□ 0.7
PMPCBO75439 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.41■□□□□ 0.7
PMPCBO75439 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.41■□□□□ 0.7
PMPCBO75439 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 AC073195.1-201ENST00000607241 877 ntBASIC19.41■□□□□ 0.7
PMPCBO75439 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.41■□□□□ 0.7
PMPCBO75439 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
PMPCBO75439 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
PMPCBO75439 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PMPCBO75439 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PMPCBO75439 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMPCBO75439 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 IRX1P1-201ENST00000438849 1838 ntBASIC19.4■□□□□ 0.7
PMPCBO75439 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.4■□□□□ 0.7
PMPCBO75439 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.4■□□□□ 0.7
PMPCBO75439 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.4■□□□□ 0.7
PMPCBO75439 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.4■□□□□ 0.7
PMPCBO75439 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PMPCBO75439 AL135905.2-201ENST00000584934 1404 ntBASIC19.4■□□□□ 0.7
PMPCBO75439 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMPCBO75439 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PMPCBO75439 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.39■□□□□ 0.7
PMPCBO75439 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.7
PMPCBO75439 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PMPCBO75439 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMPCBO75439 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
PMPCBO75439 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMPCBO75439 FAM197Y1-201ENST00000421178 764 ntBASIC19.39■□□□□ 0.69
PMPCBO75439 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.39■□□□□ 0.69
PMPCBO75439 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.39■□□□□ 0.69
PMPCBO75439 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMPCBO75439 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.39■□□□□ 0.69
PMPCBO75439 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PMPCBO75439 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMPCBO75439 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMPCBO75439 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.39■□□□□ 0.69
PMPCBO75439 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PMPCBO75439 BX323043.1-201ENST00000641006 1765 ntBASIC19.39■□□□□ 0.69
PMPCBO75439 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms