Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HCN1O60741 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HCN1O60741 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.86■□□□□ 0.45
HCN1O60741 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.86■□□□□ 0.45
HCN1O60741 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 AC073195.1-201ENST00000607241 877 ntBASIC17.86■□□□□ 0.45
HCN1O60741 AL353708.3-201ENST00000610272 989 ntBASIC17.86■□□□□ 0.45
HCN1O60741 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.86■□□□□ 0.45
HCN1O60741 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HCN1O60741 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HCN1O60741 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
HCN1O60741 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 AC090340.1-201ENST00000620778 4980 ntBASIC17.85■□□□□ 0.45
HCN1O60741 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCN1O60741 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.85■□□□□ 0.45
HCN1O60741 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HCN1O60741 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
HCN1O60741 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.85■□□□□ 0.45
HCN1O60741 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.85■□□□□ 0.45
HCN1O60741 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.85■□□□□ 0.45
HCN1O60741 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HCN1O60741 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 AC116351.2-201ENST00000606540 1585 ntBASIC17.85■□□□□ 0.45
HCN1O60741 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HCN1O60741 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCN1O60741 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
HCN1O60741 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 AP006587.1-201ENST00000534129 1502 ntBASIC17.84■□□□□ 0.45
HCN1O60741 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HCN1O60741 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HCN1O60741 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.84■□□□□ 0.45
HCN1O60741 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HCN1O60741 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCN1O60741 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
HCN1O60741 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.83■□□□□ 0.45
HCN1O60741 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCN1O60741 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HCN1O60741 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HCN1O60741 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HCN1O60741 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms