Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GFRA3O60609 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 AC211486.1-202ENST00000416371 468 ntBASIC18.59■□□□□ 0.57
GFRA3O60609 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.59■□□□□ 0.57
GFRA3O60609 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
GFRA3O60609 AC211476.1-201ENST00000503899 468 ntBASIC18.59■□□□□ 0.57
GFRA3O60609 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
GFRA3O60609 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.59■□□□□ 0.57
GFRA3O60609 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.59■□□□□ 0.57
GFRA3O60609 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.59■□□□□ 0.57
GFRA3O60609 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.59■□□□□ 0.57
GFRA3O60609 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GFRA3O60609 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
GFRA3O60609 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GFRA3O60609 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.58■□□□□ 0.57
GFRA3O60609 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.58■□□□□ 0.56
GFRA3O60609 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 AP003733.1-201ENST00000491725 852 ntBASIC18.58■□□□□ 0.56
GFRA3O60609 MIR3917-201ENST00000580971 93 ntBASIC18.58■□□□□ 0.56
GFRA3O60609 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.58■□□□□ 0.56
GFRA3O60609 AL592071.1-201ENST00000611956 408 ntBASIC18.58■□□□□ 0.56
GFRA3O60609 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GFRA3O60609 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.58■□□□□ 0.56
GFRA3O60609 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GFRA3O60609 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GFRA3O60609 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GFRA3O60609 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
GFRA3O60609 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GFRA3O60609 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
GFRA3O60609 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.57■□□□□ 0.56
GFRA3O60609 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GFRA3O60609 MIR770-201ENST00000390219 98 ntBASIC18.57■□□□□ 0.56
GFRA3O60609 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.57■□□□□ 0.56
GFRA3O60609 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.57■□□□□ 0.56
GFRA3O60609 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.57■□□□□ 0.56
GFRA3O60609 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.57■□□□□ 0.56
GFRA3O60609 AC124864.1-201ENST00000623408 392 ntBASIC18.57■□□□□ 0.56
GFRA3O60609 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
GFRA3O60609 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.57■□□□□ 0.56
GFRA3O60609 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GFRA3O60609 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 AC036111.1-201ENST00000533973 1582 ntBASIC18.56■□□□□ 0.56
GFRA3O60609 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.56■□□□□ 0.56
GFRA3O60609 POM121L3P-201ENST00000419331 1163 ntBASIC18.56■□□□□ 0.56
GFRA3O60609 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
GFRA3O60609 AP006288.1-201ENST00000446065 395 ntBASIC18.56■□□□□ 0.56
GFRA3O60609 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GFRA3O60609 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.56■□□□□ 0.56
GFRA3O60609 IGHV3-22-201ENST00000520721 359 ntBASIC18.56■□□□□ 0.56
GFRA3O60609 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.56■□□□□ 0.56
GFRA3O60609 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.56■□□□□ 0.56
GFRA3O60609 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.56■□□□□ 0.56
GFRA3O60609 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms