Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCNT1O60563 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCNT1O60563 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.72■■□□□ 1.07
CCNT1O60563 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 IRX1P1-201ENST00000438849 1838 ntBASIC21.72■■□□□ 1.07
CCNT1O60563 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.72■■□□□ 1.07
CCNT1O60563 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.72■■□□□ 1.07
CCNT1O60563 AL355075.4-201ENST00000554988 638 ntBASIC21.72■■□□□ 1.07
CCNT1O60563 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.72■■□□□ 1.07
CCNT1O60563 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNT1O60563 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.72■■□□□ 1.07
CCNT1O60563 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNT1O60563 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.71■■□□□ 1.07
CCNT1O60563 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.71■■□□□ 1.07
CCNT1O60563 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CCNT1O60563 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCNT1O60563 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.71■■□□□ 1.07
CCNT1O60563 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNT1O60563 AP000692.2-201ENST00000608391 879 ntBASIC21.71■■□□□ 1.07
CCNT1O60563 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.71■■□□□ 1.07
CCNT1O60563 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNT1O60563 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNT1O60563 AL161938.1-201ENST00000569833 2180 ntBASIC21.71■■□□□ 1.07
CCNT1O60563 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNT1O60563 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.71■■□□□ 1.07
CCNT1O60563 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNT1O60563 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.7■■□□□ 1.07
CCNT1O60563 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCNT1O60563 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCNT1O60563 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNT1O60563 RBM17P1-201ENST00000453646 1190 ntBASIC21.7■■□□□ 1.06
CCNT1O60563 TSPY15P-201ENST00000457163 923 ntBASIC21.7■■□□□ 1.06
CCNT1O60563 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCNT1O60563 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CCNT1O60563 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNT1O60563 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNT1O60563 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNT1O60563 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNT1O60563 AL049812.1-201ENST00000432563 2267 ntBASIC21.69■■□□□ 1.06
CCNT1O60563 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNT1O60563 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.69■■□□□ 1.06
CCNT1O60563 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 UNC93B2-201ENST00000285383 730 ntBASIC21.69■■□□□ 1.06
CCNT1O60563 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCNT1O60563 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNT1O60563 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNT1O60563 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.69■■□□□ 1.06
CCNT1O60563 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.69■■□□□ 1.06
CCNT1O60563 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.69■■□□□ 1.06
CCNT1O60563 DGCR10-201ENST00000609839 495 ntBASIC21.69■■□□□ 1.06
CCNT1O60563 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.69■■□□□ 1.06
CCNT1O60563 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNT1O60563 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms