Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA12O60330 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA12O60330 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 PCED1CP-201ENST00000419887 785 ntBASIC18.94■□□□□ 0.62
PCDHGA12O60330 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.94■□□□□ 0.62
PCDHGA12O60330 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 AL160286.2-201ENST00000567150 934 ntBASIC18.94■□□□□ 0.62
PCDHGA12O60330 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 AC099778.1-201ENST00000568593 1911 ntBASIC18.94■□□□□ 0.62
PCDHGA12O60330 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA12O60330 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA12O60330 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 KRT126P-201ENST00000549467 1181 ntBASIC18.93■□□□□ 0.62
PCDHGA12O60330 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA12O60330 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA12O60330 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA12O60330 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA12O60330 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA12O60330 SMG8-203ENST00000578922 2178 ntBASIC18.91■□□□□ 0.62
PCDHGA12O60330 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA12O60330 AC140113.3-201ENST00000605663 199 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms