Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.3■□□□□ 0.52
LCMT2O60294 TSPY21P-201ENST00000433481 731 ntBASIC18.3■□□□□ 0.52
LCMT2O60294 FAM207BP-201ENST00000447172 505 ntBASIC18.3■□□□□ 0.52
LCMT2O60294 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LCMT2O60294 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.3■□□□□ 0.52
LCMT2O60294 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.3■□□□□ 0.52
LCMT2O60294 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 AL049812.1-201ENST00000432563 2267 ntBASIC18.3■□□□□ 0.52
LCMT2O60294 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 IRX1P1-201ENST00000438849 1838 ntBASIC18.3■□□□□ 0.52
LCMT2O60294 AL161938.1-201ENST00000569833 2180 ntBASIC18.3■□□□□ 0.52
LCMT2O60294 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.29■□□□□ 0.52
LCMT2O60294 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.29■□□□□ 0.52
LCMT2O60294 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.29■□□□□ 0.52
LCMT2O60294 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LCMT2O60294 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.29■□□□□ 0.52
LCMT2O60294 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.29■□□□□ 0.52
LCMT2O60294 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.29■□□□□ 0.52
LCMT2O60294 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.29■□□□□ 0.52
LCMT2O60294 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LCMT2O60294 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCMT2O60294 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LCMT2O60294 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 AC079598.2-202ENST00000546624 1451 ntBASIC18.28■□□□□ 0.52
LCMT2O60294 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.28■□□□□ 0.52
LCMT2O60294 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LCMT2O60294 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 RBM17P1-201ENST00000453646 1190 ntBASIC18.28■□□□□ 0.52
LCMT2O60294 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LCMT2O60294 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.28■□□□□ 0.52
LCMT2O60294 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.28■□□□□ 0.52
LCMT2O60294 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 FEM1AP3-201ENST00000403722 1741 ntBASIC18.28■□□□□ 0.52
LCMT2O60294 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LCMT2O60294 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.28■□□□□ 0.52
LCMT2O60294 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCMT2O60294 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.27■□□□□ 0.52
LCMT2O60294 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.27■□□□□ 0.52
LCMT2O60294 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.27■□□□□ 0.52
LCMT2O60294 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.27■□□□□ 0.52
LCMT2O60294 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LCMT2O60294 AC097488.1-201ENST00000507834 756 ntBASIC18.27■□□□□ 0.52
LCMT2O60294 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.27■□□□□ 0.52
LCMT2O60294 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.27■□□□□ 0.52
LCMT2O60294 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.27■□□□□ 0.52
LCMT2O60294 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
LCMT2O60294 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.27■□□□□ 0.52
LCMT2O60294 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LCMT2O60294 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.27■□□□□ 0.52
LCMT2O60294 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.27■□□□□ 0.52
LCMT2O60294 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCMT2O60294 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCMT2O60294 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCMT2O60294 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCMT2O60294 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCMT2O60294 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCMT2O60294 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms