Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A2O43868 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC28A2O43868 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A2O43868 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A2O43868 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC28A2O43868 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 CRYGFP-201ENST00000418459 633 ntBASIC18.4■□□□□ 0.54
SLC28A2O43868 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC28A2O43868 AP002982.1-201ENST00000492365 877 ntBASIC18.4■□□□□ 0.54
SLC28A2O43868 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC28A2O43868 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC28A2O43868 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC28A2O43868 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC28A2O43868 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC28A2O43868 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC28A2O43868 HCG11-201ENST00000411553 5696 ntBASIC18.4■□□□□ 0.54
SLC28A2O43868 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC28A2O43868 AC005332.7-201ENST00000614046 2005 ntBASIC18.4■□□□□ 0.54
SLC28A2O43868 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC28A2O43868 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A2O43868 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC28A2O43868 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A2O43868 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A2O43868 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
SLC28A2O43868 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A2O43868 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC28A2O43868 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC28A2O43868 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC28A2O43868 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.39■□□□□ 0.53
SLC28A2O43868 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC28A2O43868 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC28A2O43868 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.39■□□□□ 0.53
SLC28A2O43868 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC28A2O43868 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC28A2O43868 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC28A2O43868 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A2O43868 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC28A2O43868 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC28A2O43868 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC28A2O43868 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC28A2O43868 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC28A2O43868 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC28A2O43868 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
SLC28A2O43868 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC28A2O43868 AK4P3-201ENST00000418260 669 ntBASIC18.38■□□□□ 0.53
SLC28A2O43868 AC022616.7-201ENST00000525383 220 ntBASIC18.38■□□□□ 0.53
SLC28A2O43868 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC28A2O43868 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC28A2O43868 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 NBPF21P-201ENST00000425093 1451 ntBASIC18.38■□□□□ 0.53
SLC28A2O43868 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.38■□□□□ 0.53
SLC28A2O43868 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SLC28A2O43868 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC28A2O43868 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A2O43868 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC28A2O43868 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms