Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 RPS2P55-201ENST00000397318 883 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 FAM197Y1-201ENST00000421178 764 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AC107956.1-201ENST00000494359 873 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AC233702.5-201ENST00000584107 538 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AL031985.4-201ENST00000642138 673 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 AC098818.2-201ENST00000564925 2320 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 CD177P1-201ENST00000606252 935 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 AC087289.5-201ENST00000586076 3175 ntBASIC17.03■□□□□ 0.32
TRAF3IP2O43734 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP2O43734 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 FEM1AP3-201ENST00000403722 1741 ntBASIC17.02■□□□□ 0.32
TRAF3IP2O43734 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 AC004951.3-201ENST00000418645 1148 ntBASIC17.02■□□□□ 0.32
TRAF3IP2O43734 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 AC091390.4-202ENST00000476426 537 ntBASIC17.02■□□□□ 0.32
TRAF3IP2O43734 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 AC113410.3-201ENST00000623366 203 ntBASIC17.02■□□□□ 0.32
TRAF3IP2O43734 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAF3IP2O43734 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP2O43734 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAF3IP2O43734 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP2O43734 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms