Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PHGDHO43175 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.02■□□□□ 0.64
PHGDHO43175 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PHGDHO43175 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.02■□□□□ 0.64
PHGDHO43175 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.02■□□□□ 0.64
PHGDHO43175 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.02■□□□□ 0.64
PHGDHO43175 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.02■□□□□ 0.64
PHGDHO43175 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.02■□□□□ 0.64
PHGDHO43175 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PHGDHO43175 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.02■□□□□ 0.64
PHGDHO43175 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHGDHO43175 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHGDHO43175 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
PHGDHO43175 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.02■□□□□ 0.63
PHGDHO43175 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHGDHO43175 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PHGDHO43175 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PHGDHO43175 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.02■□□□□ 0.63
PHGDHO43175 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.02■□□□□ 0.63
PHGDHO43175 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PHGDHO43175 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
PHGDHO43175 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
PHGDHO43175 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.01■□□□□ 0.63
PHGDHO43175 UNC93B5-201ENST00000530315 699 ntBASIC19.01■□□□□ 0.63
PHGDHO43175 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.01■□□□□ 0.63
PHGDHO43175 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.01■□□□□ 0.63
PHGDHO43175 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PHGDHO43175 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PHGDHO43175 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PHGDHO43175 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.01■□□□□ 0.63
PHGDHO43175 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHGDHO43175 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19■□□□□ 0.63
PHGDHO43175 HLA-L-209ENST00000420110 1011 ntBASIC19■□□□□ 0.63
PHGDHO43175 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19■□□□□ 0.63
PHGDHO43175 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19■□□□□ 0.63
PHGDHO43175 AC008403.3-201ENST00000598924 454 ntBASIC19■□□□□ 0.63
PHGDHO43175 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19■□□□□ 0.63
PHGDHO43175 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19■□□□□ 0.63
PHGDHO43175 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19■□□□□ 0.63
PHGDHO43175 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19■□□□□ 0.63
PHGDHO43175 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PHGDHO43175 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PHGDHO43175 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PHGDHO43175 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHGDHO43175 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PHGDHO43175 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.99■□□□□ 0.63
PHGDHO43175 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PHGDHO43175 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.99■□□□□ 0.63
PHGDHO43175 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.99■□□□□ 0.63
PHGDHO43175 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.99■□□□□ 0.63
PHGDHO43175 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.99■□□□□ 0.63
PHGDHO43175 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PHGDHO43175 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PHGDHO43175 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PHGDHO43175 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHGDHO43175 AC009113.1-201ENST00000570267 2443 ntBASIC18.99■□□□□ 0.63
PHGDHO43175 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms