Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.95■□□□□ 0.46
RRP8O43159 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 FP700111.2-201ENST00000619190 1892 ntBASIC17.95■□□□□ 0.46
RRP8O43159 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.95■□□□□ 0.46
RRP8O43159 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RRP8O43159 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RRP8O43159 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RRP8O43159 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.95■□□□□ 0.46
RRP8O43159 KRT8P26-201ENST00000534154 1276 ntBASIC17.95■□□□□ 0.46
RRP8O43159 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.95■□□□□ 0.46
RRP8O43159 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
RRP8O43159 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.95■□□□□ 0.46
RRP8O43159 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RRP8O43159 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.95■□□□□ 0.46
RRP8O43159 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.94■□□□□ 0.46
RRP8O43159 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
RRP8O43159 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.94■□□□□ 0.46
RRP8O43159 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.94■□□□□ 0.46
RRP8O43159 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 TSPY19P-201ENST00000418461 509 ntBASIC17.94■□□□□ 0.46
RRP8O43159 TSPY18P-201ENST00000441642 509 ntBASIC17.94■□□□□ 0.46
RRP8O43159 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 AC092597.1-201ENST00000487352 616 ntBASIC17.94■□□□□ 0.46
RRP8O43159 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.94■□□□□ 0.46
RRP8O43159 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
RRP8O43159 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RRP8O43159 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 RNF165-205ENST00000588679 2904 ntBASIC17.94■□□□□ 0.46
RRP8O43159 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 KRT18P1-202ENST00000452408 1331 ntBASIC17.94■□□□□ 0.46
RRP8O43159 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RRP8O43159 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RRP8O43159 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.93■□□□□ 0.46
RRP8O43159 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.93■□□□□ 0.46
RRP8O43159 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 CHCHD2P8-201ENST00000429873 447 ntBASIC17.93■□□□□ 0.46
RRP8O43159 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.93■□□□□ 0.46
RRP8O43159 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
RRP8O43159 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RRP8O43159 KRT8P41-201ENST00000533985 1514 ntBASIC17.93■□□□□ 0.46
RRP8O43159 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RRP8O43159 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RRP8O43159 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RRP8O43159 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RRP8O43159 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RRP8O43159 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms