Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYN3O14994 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SYN3O14994 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.21■□□□□ 0.83
SYN3O14994 AL031133.1-201ENST00000406807 723 ntBASIC20.21■□□□□ 0.83
SYN3O14994 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.21■□□□□ 0.83
SYN3O14994 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SYN3O14994 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.21■□□□□ 0.83
SYN3O14994 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SYN3O14994 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.21■□□□□ 0.83
SYN3O14994 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 AC125437.2-201ENST00000625180 2167 ntBASIC20.21■□□□□ 0.83
SYN3O14994 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYN3O14994 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.2■□□□□ 0.82
SYN3O14994 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.2■□□□□ 0.82
SYN3O14994 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.2■□□□□ 0.82
SYN3O14994 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.2■□□□□ 0.82
SYN3O14994 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SYN3O14994 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.2■□□□□ 0.82
SYN3O14994 CR769767.2-201ENST00000622735 460 ntBASIC20.2■□□□□ 0.82
SYN3O14994 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.2■□□□□ 0.82
SYN3O14994 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.2■□□□□ 0.82
SYN3O14994 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYN3O14994 KRT8P3-201ENST00000519669 1449 ntBASIC20.19■□□□□ 0.82
SYN3O14994 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.19■□□□□ 0.82
SYN3O14994 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.19■□□□□ 0.82
SYN3O14994 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.19■□□□□ 0.82
SYN3O14994 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.19■□□□□ 0.82
SYN3O14994 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.19■□□□□ 0.82
SYN3O14994 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYN3O14994 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYN3O14994 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYN3O14994 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.18■□□□□ 0.82
SYN3O14994 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYN3O14994 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.17■□□□□ 0.82
SYN3O14994 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 GPAT2P1-201ENST00000444924 1672 ntBASIC20.17■□□□□ 0.82
SYN3O14994 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.17■□□□□ 0.82
SYN3O14994 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYN3O14994 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms