Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 HTR7P1-202ENST00000624664 4411 ntBASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 IRX1P1-201ENST00000438849 1838 ntBASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 AL138781.2-201ENST00000617896 1843 ntBASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 NEFHP1-201ENST00000412845 2629 ntBASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CPSF4LA6NMK7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 FP475955.4-201ENST00000623131 1990 ntBASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 UNC93B4-201ENST00000505679 747 ntBASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 AC090192.1-201ENST00000517740 490 ntBASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 AC142086.2-201ENST00000569753 217 ntBASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPSF4LA6NMK7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 AL355802.2-201ENST00000402069 882 ntBASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CPSF4LA6NMK7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms