Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 AC068880.1-201ENST00000507289 2297 ntBASIC13.59□□□□□ -0.23
LINC01549A6NIU2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 AL162412.1-201ENST00000567129 965 ntBASIC13.59□□□□□ -0.23
LINC01549A6NIU2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 PRORSD1P-202ENST00000563365 2154 ntBASIC13.59□□□□□ -0.23
LINC01549A6NIU2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 AC139713.2-201ENST00000641328 2723 ntBASIC13.59□□□□□ -0.23
LINC01549A6NIU2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01549A6NIU2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 RASA4CP-201ENST00000424092 1398 ntBASIC13.58□□□□□ -0.23
LINC01549A6NIU2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01549A6NIU2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 AC131281.2-201ENST00000520478 145 ntBASIC13.58□□□□□ -0.24
LINC01549A6NIU2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01549A6NIU2 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.58□□□□□ -0.24
LINC01549A6NIU2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AC073592.3-201ENST00000625118 1834 ntBASIC13.57□□□□□ -0.24
LINC01549A6NIU2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SLC25A6P5-201ENST00000435663 894 ntBASIC13.57□□□□□ -0.24
LINC01549A6NIU2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 MFSD11-216ENST00000590393 1141 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms