Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 AL023973.1-201ENST00000624619 620 ntBASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TBC1D3FA6NER0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3FA6NER0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TSPY21P-201ENST00000433481 731 ntBASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3FA6NER0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D3FA6NER0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D3FA6NER0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TBC1D3FA6NER0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D3FA6NER0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D3FA6NER0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 TSPY23P-201ENST00000440136 739 ntBASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 HOMER2P1-201ENST00000455653 964 ntBASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms