Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 TSPY22P-201ENST00000427496 604 ntBASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 AC104692.2-201ENST00000603054 253 ntBASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 AL136038.4-201ENST00000603606 1261 ntBASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
PLEKHD1A6NEE1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
PLEKHD1A6NEE1 AL391807.1-203ENST00000604392 2365 ntBASIC29.45■■■□□ 2.3
PLEKHD1A6NEE1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PLEKHD1A6NEE1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 DRAXINP1-201ENST00000437611 948 ntBASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 MCCD1P1-208ENST00000445732 328 ntBASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 TPSP2-201ENST00000561760 610 ntBASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 AL732292.2-201ENST00000609649 430 ntBASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
PLEKHD1A6NEE1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 MIR3917-201ENST00000580971 93 ntBASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 SDHAP1-207ENST00000440850 2000 ntBASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC29.43■■■□□ 2.3
PLEKHD1A6NEE1 AL391422.3-201ENST00000603791 2761 ntBASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 AL031008.1-201ENST00000619963 541 ntBASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 AC112497.1-201ENST00000624824 639 ntBASIC29.42■■■□□ 2.3
PLEKHD1A6NEE1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC29.41■■■□□ 2.3
PLEKHD1A6NEE1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 AL160237.2-201ENST00000556165 472 ntBASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 RNF126P1-202ENST00000569893 925 ntBASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
PLEKHD1A6NEE1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms