Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AC104417.2-201ENST00000562989 1793 ntBASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 SEC1P-202ENST00000473944 940 ntBASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AC104692.2-201ENST00000603054 253 ntBASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 GPALPP1-207ENST00000611650 899 ntBASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 AL023284.2-201ENST00000405850 579 ntBASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 AC091304.2-201ENST00000564639 760 ntBASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 KRT18P1-202ENST00000452408 1331 ntBASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC163A0A0D9SF12 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC026310.3-201ENST00000625186 2373 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 TSPY22P-201ENST00000427496 604 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC012615.1-201ENST00000565797 1299 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AL136038.4-201ENST00000603606 1261 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC079602.3-201ENST00000623931 403 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 AC020907.5-201ENST00000624372 1936 ntBASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC163A0A0D9SF12 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CCDC163A0A0D9SF12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 EMBP1-201ENST00000458200 901 ntBASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 AC106795.1-205ENST00000512851 1056 ntBASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 TPSP2-201ENST00000561760 610 ntBASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 MIR3917-201ENST00000580971 93 ntBASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms