Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-1A0A0B4J241 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV13-1A0A0B4J241 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAV13-1A0A0B4J241 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAV13-1A0A0B4J241 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 CNN2P6-201ENST00000439038 900 ntBASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 CROCCP3-202ENST00000420820 1947 ntBASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-1A0A0B4J241 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 DUX4L16-201ENST00000555130 1264 ntBASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 AC018470.1-201ENST00000624790 3129 ntBASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-1A0A0B4J241 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 TEX21P-204ENST00000641479 1693 ntBASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms