Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AL138781.2-201ENST00000617896 1843 ntBASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC023632.3-201ENST00000521633 145 ntBASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC104581.1-202ENST00000635932 2618 ntBASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms