Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PTCH2Q9Y6C5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PTCH2Q9Y6C5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PTCH2Q9Y6C5 AC129492.7-201ENST00000622992 756 ntBASIC29.32■■■□□ 2.28
PTCH2Q9Y6C5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PTCH2Q9Y6C5 MIR219A2-201ENST00000608502 1504 ntBASIC29.31■■■□□ 2.28
PTCH2Q9Y6C5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.31■■■□□ 2.28
PTCH2Q9Y6C5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.31■■■□□ 2.28
PTCH2Q9Y6C5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PTCH2Q9Y6C5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PTCH2Q9Y6C5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PTCH2Q9Y6C5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PTCH2Q9Y6C5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.29■■■□□ 2.28
PTCH2Q9Y6C5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PTCH2Q9Y6C5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PTCH2Q9Y6C5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PTCH2Q9Y6C5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
PTCH2Q9Y6C5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
PTCH2Q9Y6C5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
PTCH2Q9Y6C5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.27■■■□□ 2.28
PTCH2Q9Y6C5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.27■■■□□ 2.28
PTCH2Q9Y6C5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.27■■■□□ 2.28
PTCH2Q9Y6C5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PTCH2Q9Y6C5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.26■■■□□ 2.27
PTCH2Q9Y6C5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTCH2Q9Y6C5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PTCH2Q9Y6C5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTCH2Q9Y6C5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTCH2Q9Y6C5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTCH2Q9Y6C5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PTCH2Q9Y6C5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
PTCH2Q9Y6C5 AC127502.1-201ENST00000399971 1502 ntBASIC29.24■■■□□ 2.27
PTCH2Q9Y6C5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTCH2Q9Y6C5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PTCH2Q9Y6C5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.23■■■□□ 2.27
PTCH2Q9Y6C5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
PTCH2Q9Y6C5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTCH2Q9Y6C5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTCH2Q9Y6C5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.22■■■□□ 2.27
PTCH2Q9Y6C5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.21■■■□□ 2.27
PTCH2Q9Y6C5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PTCH2Q9Y6C5 AL592293.1-201ENST00000502889 1188 ntBASIC29.21■■■□□ 2.27
PTCH2Q9Y6C5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.2■■■□□ 2.26
PTCH2Q9Y6C5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
PTCH2Q9Y6C5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PTCH2Q9Y6C5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.17■■■□□ 2.26
PTCH2Q9Y6C5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PTCH2Q9Y6C5 AL157400.5-201ENST00000507624 621 ntBASIC29.16■■■□□ 2.26
PTCH2Q9Y6C5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PTCH2Q9Y6C5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.16■■■□□ 2.26
PTCH2Q9Y6C5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCH2Q9Y6C5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 AC009831.1-201ENST00000580420 1582 ntBASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 AC007029.1-201ENST00000604183 313 ntBASIC29.14■■■□□ 2.26
PTCH2Q9Y6C5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 AC126177.7-201ENST00000547904 679 ntBASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 AC133552.2-201ENST00000619106 1032 ntBASIC29.13■■■□□ 2.25
PTCH2Q9Y6C5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.12■■■□□ 2.25
PTCH2Q9Y6C5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
PTCH2Q9Y6C5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PTCH2Q9Y6C5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PTCH2Q9Y6C5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PTCH2Q9Y6C5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PTCH2Q9Y6C5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
PTCH2Q9Y6C5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.1■■■□□ 2.25
PTCH2Q9Y6C5 AC131212.1-201ENST00000613771 668 ntBASIC29.1■■■□□ 2.25
PTCH2Q9Y6C5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PTCH2Q9Y6C5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.09■■■□□ 2.25
PTCH2Q9Y6C5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PTCH2Q9Y6C5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PTCH2Q9Y6C5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.08■■■□□ 2.25
PTCH2Q9Y6C5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.07■■■□□ 2.24
PTCH2Q9Y6C5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.07■■■□□ 2.24
PTCH2Q9Y6C5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
PTCH2Q9Y6C5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
PTCH2Q9Y6C5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PTCH2Q9Y6C5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PTCH2Q9Y6C5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.05■■■□□ 2.24
PTCH2Q9Y6C5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
PTCH2Q9Y6C5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.05■■■□□ 2.24
PTCH2Q9Y6C5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.05■■■□□ 2.24
PTCH2Q9Y6C5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
PTCH2Q9Y6C5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.04■■■□□ 2.24
PTCH2Q9Y6C5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.04■■■□□ 2.24
PTCH2Q9Y6C5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.03■■■□□ 2.24
PTCH2Q9Y6C5 AC009299.2-201ENST00000482477 511 ntBASIC29.03■■■□□ 2.24
PTCH2Q9Y6C5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms