Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RFPL4BQ6ZWI9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFPL4BQ6ZWI9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.39■■□□□ 1.17
RFPL4BQ6ZWI9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.38■■□□□ 1.17
RFPL4BQ6ZWI9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.38■■□□□ 1.17
RFPL4BQ6ZWI9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL4BQ6ZWI9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFPL4BQ6ZWI9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4BQ6ZWI9 AC021231.2-201ENST00000594613 730 ntBASIC22.36■■□□□ 1.17
RFPL4BQ6ZWI9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4BQ6ZWI9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.35■■□□□ 1.17
RFPL4BQ6ZWI9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
RFPL4BQ6ZWI9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RFPL4BQ6ZWI9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 AC142086.6-201ENST00000621154 1765 ntBASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 DUX4L29-201ENST00000425409 679 ntBASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.33■■□□□ 1.17
RFPL4BQ6ZWI9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RFPL4BQ6ZWI9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RFPL4BQ6ZWI9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFPL4BQ6ZWI9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4BQ6ZWI9 LINC00273-201ENST00000539813 1452 ntBASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4BQ6ZWI9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4BQ6ZWI9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RFPL4BQ6ZWI9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL4BQ6ZWI9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.26■■□□□ 1.15
RFPL4BQ6ZWI9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RFPL4BQ6ZWI9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RFPL4BQ6ZWI9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.25■■□□□ 1.15
RFPL4BQ6ZWI9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4BQ6ZWI9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4BQ6ZWI9 AP004833.2-201ENST00000532228 1454 ntBASIC22.25■■□□□ 1.15
RFPL4BQ6ZWI9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4BQ6ZWI9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4BQ6ZWI9 AC135983.2-203ENST00000454486 1613 ntBASIC22.24■■□□□ 1.15
RFPL4BQ6ZWI9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 WHAMMP2-203ENST00000563942 1603 ntBASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RFPL4BQ6ZWI9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4BQ6ZWI9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL4BQ6ZWI9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL4BQ6ZWI9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.21■■□□□ 1.15
RFPL4BQ6ZWI9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL4BQ6ZWI9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4BQ6ZWI9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms