Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.52■■■□□ 2.32
CCDC144BQ3MJ40 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC144BQ3MJ40 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC144BQ3MJ40 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CCDC144BQ3MJ40 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.45■■■□□ 2.31
CCDC144BQ3MJ40 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.43■■■□□ 2.3
CCDC144BQ3MJ40 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144BQ3MJ40 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144BQ3MJ40 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCDC144BQ3MJ40 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 RARRES2P2-201ENST00000394842 485 ntBASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 GPX1-201ENST00000419349 1106 ntBASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.37■■■□□ 2.29
CCDC144BQ3MJ40 AC142086.6-201ENST00000621154 1765 ntBASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC144BQ3MJ40 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC144BQ3MJ40 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CCDC144BQ3MJ40 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC144BQ3MJ40 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 AL135925.1-201ENST00000605920 1701 ntBASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.3■■■□□ 2.28
CCDC144BQ3MJ40 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.3■■■□□ 2.28
CCDC144BQ3MJ40 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 AC127502.1-201ENST00000399971 1502 ntBASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC144BQ3MJ40 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC144BQ3MJ40 RNF126P1-201ENST00000567452 1320 ntBASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 ABHD17AP5-201ENST00000580133 923 ntBASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.26■■■□□ 2.27
CCDC144BQ3MJ40 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC144BQ3MJ40 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CCDC144BQ3MJ40 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC144BQ3MJ40 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
CCDC144BQ3MJ40 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC144BQ3MJ40 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC144BQ3MJ40 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC144BQ3MJ40 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 AC135983.2-203ENST00000454486 1613 ntBASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 WHAMMP2-203ENST00000563942 1603 ntBASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CCDC144BQ3MJ40 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.21■■■□□ 2.27
CCDC144BQ3MJ40 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC144BQ3MJ40 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms