Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 HXT8YJL214W 1710 nt9.01□□□□□ -0.97
UFD2P54860 JHD1YER051W 1479 nt9.01□□□□□ -0.97
UFD2P54860 NUP53YMR153W 1428 nt9□□□□□ -0.97
UFD2P54860 NBA1YOL070C 1506 nt9□□□□□ -0.97
UFD2P54860 YHL030W-AYHL030W-A 462 nt8.99□□□□□ -0.97
UFD2P54860 PMU1YKL128C 888 nt8.99□□□□□ -0.97
UFD2P54860 YOR072WYOR072W 315 nt8.99□□□□□ -0.97
UFD2P54860 HXT11YOL156W 1704 nt8.99□□□□□ -0.97
UFD2P54860 PIC2YER053C 903 nt8.98□□□□□ -0.97
UFD2P54860 YJL043WYJL043W 774 nt8.98□□□□□ -0.97
UFD2P54860 RCF1YML030W 480 nt8.98□□□□□ -0.97
UFD2P54860 PRE10YOR362C 867 nt8.98□□□□□ -0.97
UFD2P54860 YGL118CYGL118C 438 nt8.96□□□□□ -0.98
UFD2P54860 FUS3YBL016W 1062 nt8.96□□□□□ -0.98
UFD2P54860 YOR268CYOR268C 399 nt8.96□□□□□ -0.98
UFD2P54860 DIP5YPL265W 1827 nt8.96□□□□□ -0.98
UFD2P54860 BUD31YCR063W 474 nt8.95□□□□□ -0.98
UFD2P54860 NAT5YOR253W 531 nt8.95□□□□□ -0.98
UFD2P54860 PET20YPL159C 762 nt8.95□□□□□ -0.98
UFD2P54860 ESBP6YNL125C 2022 nt8.94□□□□□ -0.98
UFD2P54860 snR78snR78 87 nt8.94□□□□□ -0.98
UFD2P54860 HIS3YOR202W 663 nt8.94□□□□□ -0.98
UFD2P54860 ICE2YIL090W 1476 nt8.94□□□□□ -0.98
UFD2P54860 SIR2YDL042C 1689 nt8.94□□□□□ -0.98
UFD2P54860 ABP1YCR088W 1779 nt8.93□□□□□ -0.98
UFD2P54860 INO1YJL153C 1602 nt8.92□□□□□ -0.98
UFD2P54860 PET494YNR045W 1470 nt8.92□□□□□ -0.98
UFD2P54860 YPL277CYPL277C 1464 nt8.92□□□□□ -0.98
UFD2P54860 NPL6YMR091C 1308 nt8.92□□□□□ -0.98
UFD2P54860 CBK1YNL161W 2271 nt8.92□□□□□ -0.98
UFD2P54860 SRM1YGL097W 1449 nt8.91□□□□□ -0.98
UFD2P54860 YCR049CYCR049C 447 nt8.91□□□□□ -0.98
UFD2P54860 OCA1YNL099C 717 nt8.91□□□□□ -0.98
UFD2P54860 PSP2YML017W 1782 nt8.91□□□□□ -0.98
UFD2P54860 YBL081WYBL081W 1107 nt8.9□□□□□ -0.98
UFD2P54860 LEA1YPL213W 717 nt8.9□□□□□ -0.98
UFD2P54860 YRF1-3YGR296W 5580 nt8.89□□□□□ -0.99
UFD2P54860 YRF1-6YNL339C 5580 nt8.89□□□□□ -0.99
UFD2P54860 YRF1-7YPL283C 5580 nt8.89□□□□□ -0.99
UFD2P54860 HAC1YFL031W 717 nt8.89□□□□□ -0.99
UFD2P54860 NDE2YDL085W 1638 nt8.89□□□□□ -0.99
UFD2P54860 WSC3YOL105C 1671 nt8.88□□□□□ -0.99
UFD2P54860 RRT6YGL146C 936 nt8.87□□□□□ -0.99
UFD2P54860 APT1YML022W 564 nt8.87□□□□□ -0.99
UFD2P54860 MEX67YPL169C 1800 nt8.87□□□□□ -0.99
UFD2P54860 ARG7YMR062C 1326 nt8.86□□□□□ -0.99
UFD2P54860 ALG7YBR243C 1347 nt8.86□□□□□ -0.99
UFD2P54860 MRS3YJL133W 945 nt8.86□□□□□ -0.99
UFD2P54860 TDA4YJR116W 840 nt8.86□□□□□ -0.99
UFD2P54860 MOD5YOR274W 1287 nt8.86□□□□□ -0.99
UFD2P54860 YDR476CYDR476C 675 nt8.85□□□□□ -0.99
UFD2P54860 GET2YER083C 858 nt8.85□□□□□ -0.99
UFD2P54860 URE2YNL229C 1065 nt8.85□□□□□ -0.99
UFD2P54860 AIM41YOR215C 558 nt8.85□□□□□ -0.99
UFD2P54860 MFG1YDL233W 1377 nt8.85□□□□□ -0.99
UFD2P54860 SPR1YOR190W 1338 nt8.84□□□□□ -0.99
UFD2P54860 ARO3YDR035W 1113 nt8.84□□□□□ -0.99
UFD2P54860 GLY1YEL046C 1164 nt8.84□□□□□ -0.99
UFD2P54860 YGR137WYGR137W 375 nt8.84□□□□□ -0.99
UFD2P54860 CPT1YNL130C 1182 nt8.84□□□□□ -0.99
UFD2P54860 TGL5YOR081C 2250 nt8.84□□□□□ -0.99
UFD2P54860 PNS1YOR161C 1620 nt8.83□□□□□ -1
UFD2P54860 HEM14YER014W 1620 nt8.83□□□□□ -1
UFD2P54860 WSC4YHL028W 1818 nt8.82□□□□□ -1
UFD2P54860 YEL074WYEL074W 339 nt8.82□□□□□ -1
UFD2P54860 BAP3YDR046C 1815 nt8.81□□□□□ -1
UFD2P54860 MRN1YPL184C 1839 nt8.81□□□□□ -1
UFD2P54860 MDL2YPL270W 2322 nt8.81□□□□□ -1
UFD2P54860 EHD3YDR036C 1503 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)BtD(GUC)B 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)DtD(GUC)D 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)G1tD(GUC)G1 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)G2tD(GUC)G2 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)I1tD(GUC)I1 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)I2tD(GUC)I2 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)J1tD(GUC)J1 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)J2tD(GUC)J2 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)J3tD(GUC)J3 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)J4tD(GUC)J4 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)KtD(GUC)K 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)L1tD(GUC)L1 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)L2tD(GUC)L2 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)MtD(GUC)M 72 nt8.8□□□□□ -1
UFD2P54860 tD(GUC)OtD(GUC)O 72 nt8.8□□□□□ -1
UFD2P54860 YHP1YDR451C 1062 nt8.8□□□□□ -1
UFD2P54860 INM1YHR046C 888 nt8.8□□□□□ -1
UFD2P54860 YHR145CYHR145C 357 nt8.8□□□□□ -1
UFD2P54860 MRP7YNL005C 1116 nt8.8□□□□□ -1
UFD2P54860 TIF3YPR163C 1311 nt8.8□□□□□ -1
UFD2P54860 MAK32YCR019W 1092 nt8.79□□□□□ -1
UFD2P54860 Q0144Q0144 330 nt8.79□□□□□ -1
UFD2P54860 SNP1YIL061C 903 nt8.79□□□□□ -1
UFD2P54860 YNL140CYNL140C 570 nt8.78□□□□□ -1
UFD2P54860 YPR150WYPR150W 522 nt8.78□□□□□ -1
UFD2P54860 BNA3YJL060W 1335 nt8.78□□□□□ -1
UFD2P54860 MGM101YJR144W 810 nt8.77□□□□□ -1.01
UFD2P54860 CWC25YNL245C 540 nt8.77□□□□□ -1.01
UFD2P54860 PCL10YGL134W 1302 nt8.77□□□□□ -1.01
UFD2P54860 NCA3YJL116C 1014 nt8.76□□□□□ -1.01
UFD2P54860 PRE5YMR314W 705 nt8.76□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms