Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SnrpbP27048 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SnrpbP27048 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SnrpbP27048 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SnrpbP27048 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SnrpbP27048 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SnrpbP27048 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SnrpbP27048 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SnrpbP27048 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SnrpbP27048 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.31■□□□□ 0.84
SnrpbP27048 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SnrpbP27048 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SnrpbP27048 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SnrpbP27048 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SnrpbP27048 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SnrpbP27048 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SnrpbP27048 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SnrpbP27048 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.29■□□□□ 0.84
SnrpbP27048 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SnrpbP27048 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SnrpbP27048 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SnrpbP27048 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SnrpbP27048 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SnrpbP27048 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SnrpbP27048 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SnrpbP27048 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SnrpbP27048 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SnrpbP27048 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SnrpbP27048 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SnrpbP27048 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SnrpbP27048 Gm16148-201ENSMUST00000119653 893 ntBASIC20.27■□□□□ 0.84
SnrpbP27048 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SnrpbP27048 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SnrpbP27048 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SnrpbP27048 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SnrpbP27048 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.26■□□□□ 0.83
SnrpbP27048 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SnrpbP27048 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SnrpbP27048 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SnrpbP27048 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SnrpbP27048 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SnrpbP27048 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SnrpbP27048 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SnrpbP27048 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SnrpbP27048 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.24■□□□□ 0.83
SnrpbP27048 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SnrpbP27048 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SnrpbP27048 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SnrpbP27048 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SnrpbP27048 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SnrpbP27048 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SnrpbP27048 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SnrpbP27048 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SnrpbP27048 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SnrpbP27048 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SnrpbP27048 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SnrpbP27048 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SnrpbP27048 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SnrpbP27048 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SnrpbP27048 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SnrpbP27048 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SnrpbP27048 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SnrpbP27048 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SnrpbP27048 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
SnrpbP27048 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SnrpbP27048 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SnrpbP27048 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SnrpbP27048 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SnrpbP27048 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SnrpbP27048 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SnrpbP27048 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SnrpbP27048 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SnrpbP27048 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.18■□□□□ 0.82
SnrpbP27048 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SnrpbP27048 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SnrpbP27048 Gm24804-201ENSMUST00000174982 85 ntBASIC20.17■□□□□ 0.82
SnrpbP27048 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SnrpbP27048 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SnrpbP27048 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SnrpbP27048 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.15■□□□□ 0.82
SnrpbP27048 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.15■□□□□ 0.82
SnrpbP27048 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SnrpbP27048 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SnrpbP27048 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SnrpbP27048 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SnrpbP27048 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SnrpbP27048 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SnrpbP27048 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SnrpbP27048 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SnrpbP27048 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SnrpbP27048 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SnrpbP27048 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SnrpbP27048 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SnrpbP27048 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SnrpbP27048 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms