Protein–RNA interactions for Protein: P14780

MMP9, Matrix metalloproteinase-9, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9P14780 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.28■■□□□ 1
MMP9P14780 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.28■■□□□ 1
MMP9P14780 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP9P14780 AC127502.1-201ENST00000399971 1502 ntBASIC21.28■■□□□ 1
MMP9P14780 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.28■■□□□ 1
MMP9P14780 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.27■□□□□ 0.99
MMP9P14780 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP9P14780 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP9P14780 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP9P14780 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.26■□□□□ 0.99
MMP9P14780 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP9P14780 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP9P14780 MIR3648-2-201ENST00000581792 180 ntBASIC21.26■□□□□ 0.99
MMP9P14780 MIR3648-1-201ENST00000615959 180 ntBASIC21.26■□□□□ 0.99
MMP9P14780 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP9P14780 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP9P14780 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.25■□□□□ 0.99
MMP9P14780 CR559946.2-201ENST00000623684 991 ntBASIC21.25■□□□□ 0.99
MMP9P14780 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.25■□□□□ 0.99
MMP9P14780 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP9P14780 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP9P14780 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP9P14780 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP9P14780 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP9P14780 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP9P14780 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP9P14780 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP9P14780 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP9P14780 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP9P14780 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP9P14780 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP9P14780 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP9P14780 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MMP9P14780 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L13-201ENST00000554103 1267 ntBASIC21.22■□□□□ 0.99
MMP9P14780 AC016575.1-201ENST00000607026 382 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L15-201ENST00000611059 1267 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L23-201ENST00000615195 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L24-201ENST00000617576 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L22-201ENST00000618238 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L20-201ENST00000619712 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L21-201ENST00000622058 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L10-201ENST00000622460 1267 ntBASIC21.22■□□□□ 0.99
MMP9P14780 DUX4L25-201ENST00000624915 1269 ntBASIC21.22■□□□□ 0.99
MMP9P14780 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.22■□□□□ 0.99
MMP9P14780 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP9P14780 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP9P14780 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP9P14780 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP9P14780 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MMP9P14780 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP9P14780 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP9P14780 MIR639-201ENST00000384974 98 ntBASIC21.2■□□□□ 0.98
MMP9P14780 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.2■□□□□ 0.98
MMP9P14780 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP9P14780 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP9P14780 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP9P14780 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MMP9P14780 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MMP9P14780 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
MMP9P14780 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP9P14780 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.19■□□□□ 0.98
MMP9P14780 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP9P14780 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP9P14780 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP9P14780 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP9P14780 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MMP9P14780 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
MMP9P14780 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP9P14780 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MMP9P14780 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP9P14780 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP9P14780 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP9P14780 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP9P14780 AC135983.2-203ENST00000454486 1613 ntBASIC21.16■□□□□ 0.98
MMP9P14780 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP9P14780 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP9P14780 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP9P14780 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MMP9P14780 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MMP9P14780 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP9P14780 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP9P14780 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP9P14780 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP9P14780 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP9P14780 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MMP9P14780 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP9P14780 MIR4449-201ENST00000578365 66 ntBASIC21.13■□□□□ 0.97
MMP9P14780 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP9P14780 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 WHAMMP2-203ENST00000563942 1603 ntBASIC21.12■□□□□ 0.97
MMP9P14780 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MMP9P14780 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP9P14780 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms