Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
COL11A2P13942 RARRES2P1-201ENST00000474487 481 ntBASIC31.94■■■□□ 2.7
COL11A2P13942 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.94■■■□□ 2.7
COL11A2P13942 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
COL11A2P13942 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.93■■■□□ 2.7
COL11A2P13942 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL11A2P13942 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL11A2P13942 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
COL11A2P13942 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL11A2P13942 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL11A2P13942 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL11A2P13942 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.91■■■□□ 2.7
COL11A2P13942 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.91■■■□□ 2.7
COL11A2P13942 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL11A2P13942 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL11A2P13942 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
COL11A2P13942 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
COL11A2P13942 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
COL11A2P13942 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.89■■■□□ 2.69
COL11A2P13942 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
COL11A2P13942 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL11A2P13942 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.88■■■□□ 2.69
COL11A2P13942 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.88■■■□□ 2.69
COL11A2P13942 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.88■■■□□ 2.69
COL11A2P13942 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
COL11A2P13942 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.88■■■□□ 2.69
COL11A2P13942 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.88■■■□□ 2.69
COL11A2P13942 ATP5G2P3-201ENST00000429083 425 ntBASIC31.87■■■□□ 2.69
COL11A2P13942 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
COL11A2P13942 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL11A2P13942 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.86■■■□□ 2.69
COL11A2P13942 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL11A2P13942 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL11A2P13942 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
COL11A2P13942 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL11A2P13942 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL11A2P13942 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.84■■■□□ 2.69
COL11A2P13942 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
COL11A2P13942 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.84■■■□□ 2.69
COL11A2P13942 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.83■■■□□ 2.69
COL11A2P13942 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL11A2P13942 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL11A2P13942 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.83■■■□□ 2.69
COL11A2P13942 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL11A2P13942 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL11A2P13942 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL11A2P13942 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
COL11A2P13942 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.78■■■□□ 2.68
COL11A2P13942 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
COL11A2P13942 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COL11A2P13942 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL11A2P13942 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.78■■■□□ 2.68
COL11A2P13942 AL135925.1-201ENST00000605920 1701 ntBASIC31.77■■■□□ 2.68
COL11A2P13942 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL11A2P13942 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
COL11A2P13942 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL11A2P13942 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.74■■■□□ 2.67
COL11A2P13942 ECEL1P2-201ENST00000461596 1295 ntBASIC31.74■■■□□ 2.67
COL11A2P13942 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL11A2P13942 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL11A2P13942 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COL11A2P13942 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COL11A2P13942 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COL11A2P13942 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.72■■■□□ 2.67
COL11A2P13942 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL11A2P13942 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL11A2P13942 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
COL11A2P13942 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL11A2P13942 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL11A2P13942 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL11A2P13942 AC007029.1-201ENST00000604183 313 ntBASIC31.7■■■□□ 2.67
COL11A2P13942 AL451085.2-201ENST00000605085 799 ntBASIC31.69■■■□□ 2.66
COL11A2P13942 AC129492.7-201ENST00000622992 756 ntBASIC31.69■■■□□ 2.66
COL11A2P13942 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.69■■■□□ 2.66
COL11A2P13942 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL11A2P13942 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL11A2P13942 AL592293.1-201ENST00000502889 1188 ntBASIC31.67■■■□□ 2.66
COL11A2P13942 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL11A2P13942 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL11A2P13942 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
COL11A2P13942 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
COL11A2P13942 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL11A2P13942 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.64■■■□□ 2.66
COL11A2P13942 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
COL11A2P13942 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL11A2P13942 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.63■■■□□ 2.65
COL11A2P13942 AC009831.1-201ENST00000580420 1582 ntBASIC31.62■■■□□ 2.65
COL11A2P13942 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL11A2P13942 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
COL11A2P13942 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL11A2P13942 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL11A2P13942 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL11A2P13942 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.6■■■□□ 2.65
COL11A2P13942 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms