Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SHO1YER118C 1104 nt7.5□□□□□ -1.21
CDC9P04819 ORT1YOR130C 879 nt7.5□□□□□ -1.21
CDC9P04819 SAN1YDR143C 1833 nt7.5□□□□□ -1.21
CDC9P04819 TPN1YGL186C 1740 nt7.49□□□□□ -1.21
CDC9P04819 VBA3YCL069W 1377 nt7.48□□□□□ -1.21
CDC9P04819 SBP1YHL034C 885 nt7.48□□□□□ -1.21
CDC9P04819 YBR226CYBR226C 411 nt7.48□□□□□ -1.21
CDC9P04819 NAM8YHR086W 1572 nt7.47□□□□□ -1.21
CDC9P04819 YIR018C-AYIR018C-A 138 nt7.47□□□□□ -1.21
CDC9P04819 ALG7YBR243C 1347 nt7.47□□□□□ -1.21
CDC9P04819 YMR210WYMR210W 1350 nt7.46□□□□□ -1.21
CDC9P04819 STF1YDL130W-A 261 nt7.46□□□□□ -1.22
CDC9P04819 COS6YGR295C 1146 nt7.46□□□□□ -1.22
CDC9P04819 OCA1YNL099C 717 nt7.46□□□□□ -1.22
CDC9P04819 GDH1YOR375C 1365 nt7.46□□□□□ -1.22
CDC9P04819 tL(UAA)B1tL(UAA)B1 84 nt7.45□□□□□ -1.22
CDC9P04819 tL(UAA)B2tL(UAA)B2 84 nt7.45□□□□□ -1.22
CDC9P04819 tL(UAA)DtL(UAA)D 84 nt7.45□□□□□ -1.22
CDC9P04819 SUP51tL(UAA)J 84 nt7.45□□□□□ -1.22
CDC9P04819 tL(UAA)KtL(UAA)K 84 nt7.45□□□□□ -1.22
CDC9P04819 tL(UAA)LtL(UAA)L 84 nt7.45□□□□□ -1.22
CDC9P04819 tL(UAA)NtL(UAA)N 84 nt7.45□□□□□ -1.22
CDC9P04819 snR4snR4 186 nt7.45□□□□□ -1.22
CDC9P04819 BUD9YGR041W 1644 nt7.45□□□□□ -1.22
CDC9P04819 DUS3YLR401C 2007 nt7.44□□□□□ -1.22
CDC9P04819 GUT1YHL032C 2130 nt7.44□□□□□ -1.22
CDC9P04819 MRS4YKR052C 915 nt7.44□□□□□ -1.22
CDC9P04819 AVO2YMR068W 1281 nt7.44□□□□□ -1.22
CDC9P04819 ALR1YOL130W 2580 nt7.44□□□□□ -1.22
CDC9P04819 YDR401WYDR401W 564 nt7.43□□□□□ -1.22
CDC9P04819 YHR140WYHR140W 720 nt7.43□□□□□ -1.22
CDC9P04819 REX2YLR059C 810 nt7.43□□□□□ -1.22
CDC9P04819 YNL017CYNL017C 339 nt7.43□□□□□ -1.22
CDC9P04819 YLR460CYLR460C 1131 nt7.42□□□□□ -1.22
CDC9P04819 CWC25YNL245C 540 nt7.42□□□□□ -1.22
CDC9P04819 snR86snR86 1004 nt7.41□□□□□ -1.22
CDC9P04819 ADA2YDR448W 1305 nt7.41□□□□□ -1.22
CDC9P04819 FIT1YDR534C 1587 nt7.41□□□□□ -1.22
CDC9P04819 PET18YCR020C 648 nt7.4□□□□□ -1.22
CDC9P04819 KAE1YKR038C 1161 nt7.4□□□□□ -1.22
CDC9P04819 UTP6YDR449C 1323 nt7.4□□□□□ -1.22
CDC9P04819 DPB2YPR175W 2070 nt7.39□□□□□ -1.23
CDC9P04819 SRP54YPR088C 1626 nt7.39□□□□□ -1.23
CDC9P04819 MRS3YJL133W 945 nt7.39□□□□□ -1.23
CDC9P04819 LEA1YPL213W 717 nt7.39□□□□□ -1.23
CDC9P04819 BAP3YDR046C 1815 nt7.38□□□□□ -1.23
CDC9P04819 YFR020WYFR020W 699 nt7.38□□□□□ -1.23
CDC9P04819 REV7YIL139C 738 nt7.38□□□□□ -1.23
CDC9P04819 YIR017W-AYIR017W-A 600 nt7.38□□□□□ -1.23
CDC9P04819 TAD2YJL035C 753 nt7.38□□□□□ -1.23
CDC9P04819 PRE5YMR314W 705 nt7.38□□□□□ -1.23
CDC9P04819 HAL5YJL165C 2568 nt7.38□□□□□ -1.23
CDC9P04819 GFA1YKL104C 2154 nt7.37□□□□□ -1.23
CDC9P04819 YIL177CYIL177C 5277 nt7.37□□□□□ -1.23
CDC9P04819 UFD1YGR048W 1086 nt7.37□□□□□ -1.23
CDC9P04819 TIF2YJL138C 1188 nt7.37□□□□□ -1.23
CDC9P04819 TIF1YKR059W 1188 nt7.37□□□□□ -1.23
CDC9P04819 COA2YPL189C-A 207 nt7.37□□□□□ -1.23
CDC9P04819 PRE2YPR103W 864 nt7.37□□□□□ -1.23
CDC9P04819 ABP1YCR088W 1779 nt7.37□□□□□ -1.23
CDC9P04819 GAS1YMR307W 1680 nt7.37□□□□□ -1.23
CDC9P04819 ADE16YLR028C 1776 nt7.36□□□□□ -1.23
CDC9P04819 TAF11YML015C 1041 nt7.36□□□□□ -1.23
CDC9P04819 YMR166CYMR166C 1107 nt7.36□□□□□ -1.23
CDC9P04819 YPR150WYPR150W 522 nt7.36□□□□□ -1.23
CDC9P04819 YPL247CYPL247C 1572 nt7.36□□□□□ -1.23
CDC9P04819 ENP1YBR247C 1452 nt7.36□□□□□ -1.23
CDC9P04819 ADE5,7YGL234W 2409 nt7.36□□□□□ -1.23
CDC9P04819 PTC6YCR079W 1329 nt7.35□□□□□ -1.23
CDC9P04819 CDC10YCR002C 969 nt7.35□□□□□ -1.23
CDC9P04819 RRP1YDR087C 837 nt7.35□□□□□ -1.23
CDC9P04819 YJL107CYJL107C 1164 nt7.35□□□□□ -1.23
CDC9P04819 SDH8YBR269C 417 nt7.35□□□□□ -1.23
CDC9P04819 TMS1YDR105C 1422 nt7.35□□□□□ -1.23
CDC9P04819 ECM10YEL030W 1935 nt7.35□□□□□ -1.23
CDC9P04819 DIA4YHR011W 1341 nt7.34□□□□□ -1.23
CDC9P04819 RRP46YGR095C 672 nt7.34□□□□□ -1.23
CDC9P04819 MFT1YML062C 1179 nt7.34□□□□□ -1.23
CDC9P04819 YPT11YNL304W 1254 nt7.34□□□□□ -1.23
CDC9P04819 RSM23YGL129C 1353 nt7.33□□□□□ -1.24
CDC9P04819 GDA1YEL042W 1557 nt7.33□□□□□ -1.24
CDC9P04819 ICE2YIL090W 1476 nt7.33□□□□□ -1.24
CDC9P04819 YER156CYER156C 1017 nt7.33□□□□□ -1.24
CDC9P04819 LSP1YPL004C 1026 nt7.33□□□□□ -1.24
CDC9P04819 YRF1-3YGR296W 5580 nt7.33□□□□□ -1.24
CDC9P04819 YRF1-6YNL339C 5580 nt7.33□□□□□ -1.24
CDC9P04819 YRF1-7YPL283C 5580 nt7.33□□□□□ -1.24
CDC9P04819 FUS3YBL016W 1062 nt7.32□□□□□ -1.24
CDC9P04819 HIS3YOR202W 663 nt7.32□□□□□ -1.24
CDC9P04819 ELP4YPL101W 1371 nt7.32□□□□□ -1.24
CDC9P04819 NUP57YGR119C 1626 nt7.31□□□□□ -1.24
CDC9P04819 CDS1YBR029C 1374 nt7.31□□□□□ -1.24
CDC9P04819 TRP1YDR007W 675 nt7.3□□□□□ -1.24
CDC9P04819 RRT14YIL127C 621 nt7.3□□□□□ -1.24
CDC9P04819 ADE1YAR015W 921 nt7.3□□□□□ -1.24
CDC9P04819 UTR5YEL035C 501 nt7.29□□□□□ -1.24
CDC9P04819 NAT5YOR253W 531 nt7.29□□□□□ -1.24
CDC9P04819 POX1YGL205W 2247 nt7.28□□□□□ -1.24
CDC9P04819 YBR056WYBR056W 1506 nt7.28□□□□□ -1.24
CDC9P04819 ERP5YHR110W 639 nt7.28□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 66.3 ms