Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 Y_RNA.33-201ENST00000362591 102 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 Y_RNA.136-201ENST00000363444 102 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 RNU1-84P-201ENST00000365447 164 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 RNU6-898P-201ENST00000365627 104 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 Y_RNA.446-201ENST00000384178 104 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AL358472.1-201ENST00000431295 329 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 SEPT7P4-201ENST00000437076 306 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 MRPS10P1-201ENST00000448483 130 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC083899.1-201ENST00000454465 3819 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC117440.1-201ENST00000474107 571 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 RN7SL369P-201ENST00000477138 299 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 HMGB3P16-201ENST00000508037 287 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 APOOP4-201ENST00000513530 597 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 GMPSP1-201ENST00000514075 579 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 Y_RNA.686-201ENST00000516548 134 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 snoU109.6-201ENST00000516831 118 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 MIR6736-201ENST00000616799 59 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC006001.4-201ENST00000622243 395 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 AC009962.1-201ENST00000567327 3813 ntBASIC4.48□□□□□ -1.69
SSBP4Q9BWG4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AL731532.2-201ENST00000623542 1953 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 UBE2L2-201ENST00000254302 429 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RNU1-49P-201ENST00000363468 159 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RNU6-818P-201ENST00000364837 108 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 MIR539-201ENST00000365690 78 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RNU6-1056P-201ENST00000383996 107 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RNU6-318P-201ENST00000384283 103 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 LAP3P1-201ENST00000403648 294 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RNU2-43P-201ENST00000410306 190 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 SNORD12B-201ENST00000410433 91 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 MYL6P5-201ENST00000412707 459 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 TBCAP2-201ENST00000416175 326 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 PPIAP23-201ENST00000420099 497 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RAB28P5-201ENST00000427490 651 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 HSPD1P21-201ENST00000436541 245 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 KNOP1P3-201ENST00000446933 426 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 BX276092.4-201ENST00000452056 248 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RN7SL799P-201ENST00000475891 298 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 CYCTP-201ENST00000504253 315 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AP002001.1-203ENST00000534002 267 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC023575.1-201ENST00000580510 358 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC060766.3-201ENST00000591442 263 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC008121.1-201ENST00000603244 268 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AL139395.1-201ENST00000603662 160 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RPL23AP88-201ENST00000605759 454 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RN7SL261P-201ENST00000613441 282 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AL161629.2-201ENST00000615347 275 ntBASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP4Q9BWG4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms