Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC032011.1-201ENST00000611703 1549 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RNU6-38P-201ENST00000384085 107 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MIR129-1-201ENST00000384972 72 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RPS26P8-201ENST00000393490 348 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 SNORA3C-201ENST00000408792 125 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC091390.3-201ENST00000426478 338 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 ERLEC1P1-201ENST00000433806 578 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC016696.1-201ENST00000446949 318 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RPS17P13-201ENST00000448974 407 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RNU6-333P-201ENST00000459117 107 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MRPS17P3-201ENST00000465453 385 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RPS29P19-201ENST00000479709 171 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RN7SL691P-201ENST00000494487 301 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RNU4-29P-201ENST00000515943 174 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 RNU4-49P-201ENST00000516080 140 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC022882.1-201ENST00000532142 501 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AL133271.1-201ENST00000538229 291 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MIR4444-1-201ENST00000581696 74 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MIR3124-201ENST00000582636 67 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MIR4444-2-201ENST00000584390 74 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MIR4424-201ENST00000585257 86 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC113403.1-201ENST00000604910 193 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AL445567.2-201ENST00000618935 498 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC040168.1-201ENST00000623594 991 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AL158163.1-201ENST00000603915 1649 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 AC025031.4-201ENST00000621248 3271 ntBASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 Y_RNA.67-201ENST00000362870 100 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 Y_RNA.326-201ENST00000365176 113 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC019155.1-201ENST00000382242 574 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC009161.1-201ENST00000417306 376 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 OR1AA1P-201ENST00000419597 916 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC005534.2-201ENST00000431047 433 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC024082.2-201ENST00000434771 238 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 NUTF2P3-201ENST00000448540 384 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 HMGB1P25-201ENST00000468402 607 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 RN7SL812P-201ENST00000493791 279 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 TTC39CP1-201ENST00000512513 755 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 Y_RNA.665-201ENST00000516177 98 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 RNU6-798P-201ENST00000516912 103 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 IGKV2-38-201ENST00000517443 247 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 HMGB1P41-201ENST00000520234 440 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 MIR4293-201ENST00000584305 78 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AC113139.1-201ENST00000605049 239 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AL136313.1-201ENST00000624804 202 ntBASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.81□□□□□ -1.64
CHAMP1Q96JM3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 AL133243.3-201ENST00000617415 3004 ntBASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 RNU6-989P-201ENST00000362756 107 ntBASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 RNU6-552P-201ENST00000362869 119 ntBASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 RNU6-522P-201ENST00000364497 107 ntBASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 RNA5SP509-201ENST00000364577 119 ntBASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHAMP1Q96JM3 RNU6-692P-201ENST00000384496 107 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms