Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC022441.3-201ENST00000605737 136 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
VARS2Q5ST30 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 RNY1P11-201ENST00000363759 113 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 SNORD51-201ENST00000384320 80 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 SNORA70-201ENST00000384436 135 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 RNU6-813P-201ENST00000384691 107 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 MIR548A3-201ENST00000385297 97 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 COX6B1P7-201ENST00000430845 235 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 RPS12P17-201ENST00000438591 377 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 RNU6-1114P-201ENST00000516022 107 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 snoMBII-202.2-201ENST00000517263 86 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 AC005176.2-201ENST00000596933 147 ntBASIC6.27□□□□□ -1.41
VARS2Q5ST30 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VARS2Q5ST30 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VARS2Q5ST30 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 MAPK10-338ENST00000641647 3362 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 U3.7-201ENST00000363668 216 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RNA5SP132-201ENST00000364725 118 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RNU6-1293P-201ENST00000384077 107 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RNU6-19P-201ENST00000384718 107 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 SNORD78.1-201ENST00000390866 65 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC009296.1-201ENST00000443146 155 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC146944.2-203ENST00000502493 354 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC139495.1-202ENST00000513164 354 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RNU6-27P-201ENST00000516146 107 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RN7SKP258-201ENST00000517151 304 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 EIF4A2P5-201ENST00000529914 499 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC023575.1-201ENST00000580510 358 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 MIR3145-201ENST00000580727 82 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 SNORD91B-202ENST00000608459 222 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 RN7SL544P-201ENST00000617232 284 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 RN7SL763P-201ENST00000620922 284 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 RNU6-156P-201ENST00000621869 107 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 SCARNA4-201ENST00000629045 128 ntBASIC6.26□□□□□ -1.41
VARS2Q5ST30 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VARS2Q5ST30 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.26□□□□□ -1.41
VARS2Q5ST30 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms