Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.45□□□□□ -1.38
NUBP1P53384 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 AL133383.2-201ENST00000622958 2336 ntBASIC6.45□□□□□ -1.38
NUBP1P53384 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.45□□□□□ -1.38
NUBP1P53384 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NUBP1P53384 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.45□□□□□ -1.38
NUBP1P53384 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.45□□□□□ -1.38
NUBP1P53384 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.45□□□□□ -1.38
NUBP1P53384 AC005618.1-201ENST00000606901 3148 ntBASIC6.45□□□□□ -1.38
NUBP1P53384 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUBP1P53384 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.44□□□□□ -1.38
NUBP1P53384 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.44□□□□□ -1.38
NUBP1P53384 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 SMG1P4-204ENST00000523028 4131 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AC126755.2-208ENST00000327792 462 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AC138969.1-213ENST00000331436 462 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 MIR450A1-201ENST00000362262 91 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 SNORD16-201ENST00000362803 99 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 Y_RNA.368-201ENST00000365547 113 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 RNU6-597P-201ENST00000365620 102 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AL357515.1-201ENST00000402967 542 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 RNU4-43P-201ENST00000410628 137 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.44□□□□□ -1.38
NUBP1P53384 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.44□□□□□ -1.38
NUBP1P53384 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AC023141.3-201ENST00000436698 278 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AL353748.1-201ENST00000440753 474 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 AC073850.1-201ENST00000449243 255 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 RN7SL326P-201ENST00000477493 296 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 RN7SL591P-201ENST00000496150 292 ntBASIC6.44□□□□□ -1.38
NUBP1P53384 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.44□□□□□ -1.38
NUBP1P53384 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
NUBP1P53384 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
NUBP1P53384 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUBP1P53384 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.43□□□□□ -1.38
NUBP1P53384 SNORA21-201ENST00000362423 132 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 Y_RNA.341-201ENST00000365341 102 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 RNY3P5-201ENST00000384127 102 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 Y_RNA.456-201ENST00000384232 111 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 RNU6-880P-201ENST00000384526 107 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 RNU6-855P-201ENST00000410395 104 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AC245047.4-201ENST00000433189 144 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AC090958.1-201ENST00000511122 351 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC6.43□□□□□ -1.38
NUBP1P53384 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.43□□□□□ -1.38
NUBP1P53384 MIR6748-201ENST00000610433 71 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 MIR7155-201ENST00000615925 56 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AC106754.2-201ENST00000623006 233 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AP002799.1-201ENST00000623552 423 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
NUBP1P53384 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NUBP1P53384 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 TATDN2P3-201ENST00000452855 3665 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NUBP1P53384 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms