Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 PPIAP32-201ENST00000449940 472 ntBASIC6.83□□□□□ -1.32
CD44P16070 Y_RNA.690-201ENST00000516603 95 ntBASIC6.83□□□□□ -1.32
CD44P16070 RNU6-1198P-201ENST00000516904 67 ntBASIC6.83□□□□□ -1.32
CD44P16070 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
CD44P16070 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 GNRHR2P1-201ENST00000555315 631 ntBASIC6.83□□□□□ -1.32
CD44P16070 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.83□□□□□ -1.32
CD44P16070 MIR132-201ENST00000591554 101 ntBASIC6.83□□□□□ -1.32
CD44P16070 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.83□□□□□ -1.32
CD44P16070 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CD44P16070 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.83□□□□□ -1.32
CD44P16070 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 SNORD115-8-201ENST00000363856 82 ntBASIC6.82□□□□□ -1.32
CD44P16070 SNORD115-38-201ENST00000365037 82 ntBASIC6.82□□□□□ -1.32
CD44P16070 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.82□□□□□ -1.32
CD44P16070 GNG5P2-201ENST00000372054 207 ntBASIC6.82□□□□□ -1.32
CD44P16070 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.82□□□□□ -1.32
CD44P16070 AC008134.1-201ENST00000420943 193 ntBASIC6.82□□□□□ -1.32
CD44P16070 MTATP8P2-201ENST00000435212 202 ntBASIC6.82□□□□□ -1.32
CD44P16070 RPS19P6-201ENST00000441327 433 ntBASIC6.82□□□□□ -1.32
CD44P16070 AL589765.3-201ENST00000446084 462 ntBASIC6.82□□□□□ -1.32
CD44P16070 RPL39P34-201ENST00000477141 156 ntBASIC6.82□□□□□ -1.32
CD44P16070 FTH1P24-201ENST00000503502 462 ntBASIC6.82□□□□□ -1.32
CD44P16070 RNA5SP471-201ENST00000516971 106 ntBASIC6.82□□□□□ -1.32
CD44P16070 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.82□□□□□ -1.32
CD44P16070 MIR378D2-201ENST00000580636 98 ntBASIC6.82□□□□□ -1.32
CD44P16070 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.82□□□□□ -1.32
CD44P16070 RN7SL261P-201ENST00000613441 282 ntBASIC6.82□□□□□ -1.32
CD44P16070 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC6.82□□□□□ -1.32
CD44P16070 MIR2052-201ENST00000636055 55 ntBASIC6.82□□□□□ -1.32
CD44P16070 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.82□□□□□ -1.32
CD44P16070 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CD44P16070 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 OR4F13P-202ENST00000560066 2054 ntBASIC6.81□□□□□ -1.32
CD44P16070 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 RNU5A-1-201ENST00000362698 116 ntBASIC6.81□□□□□ -1.32
CD44P16070 SNORA72-201ENST00000384339 132 ntBASIC6.81□□□□□ -1.32
CD44P16070 Y_RNA.549-201ENST00000384657 102 ntBASIC6.81□□□□□ -1.32
CD44P16070 RNU6-136P-201ENST00000384663 107 ntBASIC6.81□□□□□ -1.32
CD44P16070 RPL21P17-201ENST00000397467 475 ntBASIC6.81□□□□□ -1.32
CD44P16070 AC092447.6-201ENST00000414578 210 ntBASIC6.81□□□□□ -1.32
CD44P16070 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC6.81□□□□□ -1.32
CD44P16070 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.81□□□□□ -1.32
CD44P16070 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.81□□□□□ -1.32
CD44P16070 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.81□□□□□ -1.32
CD44P16070 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 AC012158.1-204ENST00000483430 465 ntBASIC6.81□□□□□ -1.32
CD44P16070 AC022137.1-201ENST00000483735 151 ntBASIC6.81□□□□□ -1.32
CD44P16070 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.81□□□□□ -1.32
CD44P16070 KHDC1P1-201ENST00000511053 508 ntBASIC6.81□□□□□ -1.32
CD44P16070 SNORA70.11-201ENST00000515987 138 ntBASIC6.81□□□□□ -1.32
CD44P16070 SNORA70.13-201ENST00000516116 138 ntBASIC6.81□□□□□ -1.32
CD44P16070 RNU6-927P-201ENST00000516199 100 ntBASIC6.81□□□□□ -1.32
CD44P16070 AC016256.1-201ENST00000547971 354 ntBASIC6.81□□□□□ -1.32
CD44P16070 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.81□□□□□ -1.32
CD44P16070 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.81□□□□□ -1.32
CD44P16070 MIR212-201ENST00000586026 110 ntBASIC6.81□□□□□ -1.32
CD44P16070 RNU6-94P-201ENST00000607728 107 ntBASIC6.81□□□□□ -1.32
CD44P16070 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CD44P16070 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CD44P16070 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.81□□□□□ -1.32
CD44P16070 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.81□□□□□ -1.32
CD44P16070 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 AC092070.2-203ENST00000598377 3644 ntBASIC6.8□□□□□ -1.32
CD44P16070 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.8□□□□□ -1.32
CD44P16070 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.8□□□□□ -1.32
CD44P16070 RNU6-324P-201ENST00000363957 106 ntBASIC6.8□□□□□ -1.32
CD44P16070 RN7SKP275-201ENST00000364626 301 ntBASIC6.8□□□□□ -1.32
CD44P16070 U3.19-201ENST00000390893 196 ntBASIC6.8□□□□□ -1.32
CD44P16070 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 SNORA77.2-201ENST00000408571 112 ntBASIC6.8□□□□□ -1.32
CD44P16070 RPL31P2-201ENST00000413849 377 ntBASIC6.8□□□□□ -1.32
CD44P16070 PGBD4P5-201ENST00000445958 426 ntBASIC6.8□□□□□ -1.32
CD44P16070 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.8□□□□□ -1.32
CD44P16070 RPL39P39-201ENST00000455840 151 ntBASIC6.8□□□□□ -1.32
CD44P16070 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 RN7SKP21-201ENST00000516503 220 ntBASIC6.8□□□□□ -1.32
CD44P16070 RNU6-504P-201ENST00000516568 104 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms