Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 U3.7-201ENST00000363668 216 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.458-201ENST00000384240 102 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 BX842559.1-201ENST00000419615 532 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 RPS15AP40-201ENST00000419621 391 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC239809.1-201ENST00000450470 217 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC008953.1-201ENST00000497334 318 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-1338P-201ENST00000516328 91 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.683-201ENST00000516508 93 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AP002392.1-201ENST00000537692 208 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 CPDP1-201ENST00000579660 283 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 SNORD39.4-201ENST00000620099 78 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 AL450345.1-202ENST00000605741 3881 ntBASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC4Q9Y5F7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RLIMP1-201ENST00000339626 1680 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 U3.3-201ENST00000362986 216 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.199-201ENST00000364014 102 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RNA5SP90-201ENST00000364801 99 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RN7SKP153-201ENST00000365026 316 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR600-201ENST00000385007 98 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 SNORD115-46-201ENST00000390982 71 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RNA5SP241-201ENST00000391326 114 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AL591034.2-201ENST00000402839 359 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AL513475.1-201ENST00000406602 315 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AL139148.1-201ENST00000427122 680 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 FTLP19-201ENST00000433300 394 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AL513124.1-201ENST00000450410 614 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 snoU109.4-201ENST00000458953 143 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC009127.1-201ENST00000467090 155 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RN7SL222P-201ENST00000476452 299 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 OR51K1P-201ENST00000510214 950 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC087369.1-201ENST00000520775 996 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 TRAV32-201ENST00000553993 340 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 RN7SL290P-201ENST00000578661 300 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR5701-3-201ENST00000578890 82 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR5701-1-201ENST00000585138 82 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 AC008814.1-201ENST00000603797 406 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR15A-201ENST00000607334 83 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR5701-2-201ENST00000615634 82 ntBASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 C4BPAP1-201ENST00000415474 1893 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 IQCB2P-201ENST00000401788 1633 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.16-201ENST00000362421 102 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 SNORD81.1-201ENST00000363064 77 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 OR1L6-202ENST00000373684 1044 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-1081P-201ENST00000384537 107 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR589-201ENST00000385238 99 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-700P-201ENST00000391043 107 ntBASIC5.28□□□□□ -1.56
PCDHGC4Q9Y5F7 AL109941.1-201ENST00000401925 229 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms