Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 RNU6-1122P-201ENST00000384449 107 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 MTND4P6-201ENST00000438297 472 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AL589880.1-201ENST00000448271 287 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 RPL39P6-201ENST00000448289 150 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 USP9YP34-201ENST00000453983 808 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 OR4G11P-201ENST00000492842 939 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AC006390.1-201ENST00000508068 283 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 MTND4LP22-201ENST00000508209 276 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AC026412.2-201ENST00000512270 1075 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 OR4P1P-201ENST00000530808 1136 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 HIGD1AP17-201ENST00000554576 276 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 U6.101-201ENST00000637707 76 ntBASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPC1L1Q9UHC9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 RNU6-560P-201ENST00000364007 108 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 U3.29-201ENST00000391296 212 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 SNRPEP2-201ENST00000397592 279 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 RNU2-15P-201ENST00000410692 191 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AL161449.1-201ENST00000414531 1199 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC106883.1-201ENST00000418805 562 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 RPS3AP37-201ENST00000419176 745 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 EEF1A1P39-201ENST00000440791 250 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 MTND2P20-201ENST00000440805 661 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 EXOSC3P1-201ENST00000448649 500 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 MTND2P19-201ENST00000449129 1012 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 OFD1P3Y-201ENST00000453312 783 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 ANXA2P1-201ENST00000505539 926 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC113420.1-201ENST00000507903 571 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 CKS1BP7-201ENST00000522230 235 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AP002770.2-201ENST00000543613 532 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 HSPE1P3-201ENST00000559254 309 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC027176.1-201ENST00000560204 514 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 MIR4637-201ENST00000582405 84 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC091057.3-201ENST00000602684 733 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 XIAPP1-201ENST00000603162 600 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 RPP40P2-201ENST00000603596 712 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC007621.1-201ENST00000604544 437 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC067747.1-201ENST00000608026 250 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AL451074.6-201ENST00000608512 729 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.35□□□□□ -1.87
NPC1L1Q9UHC9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
NPC1L1Q9UHC9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPC1L1Q9UHC9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NPC1L1Q9UHC9 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 SNRPEP3-201ENST00000338402 276 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 SNORD51-201ENST00000384320 80 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 Y_RNA.472-201ENST00000384322 102 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AL590084.1-201ENST00000407885 387 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 snoU13.26-201ENST00000459452 105 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AC026410.2-201ENST00000460281 156 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AC011979.1-201ENST00000472300 483 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AC114981.1-201ENST00000503897 678 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 RNU6-27P-201ENST00000516146 107 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 SLC2A13P1-201ENST00000531560 322 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 MIR1291-201ENST00000627649 87 ntBASIC3.34□□□□□ -1.88
NPC1L1Q9UHC9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL162578.1-201ENST00000406202 378 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SNORA3.2-201ENST00000408221 125 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 RNU6-712P-201ENST00000410558 100 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 ZYG11AP1-201ENST00000430329 837 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 USP9YP24-201ENST00000434374 697 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 USP9YP17-201ENST00000444617 696 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms