Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC069061.3-201ENST00000582254 823 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
DDX1Q92499 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 MIR6891-201ENST00000618788 93 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC091905.2-201ENST00000623143 306 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AL133216.2-202ENST00000634512 349 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC006020.1-201ENST00000420179 1854 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX1Q92499 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC139769.1-204ENST00000472297 1931 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX1Q92499 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX1Q92499 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX1Q92499 Y_RNA.31-201ENST00000362574 102 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RNU6-1309P-201ENST00000363305 108 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RN7SKP44-201ENST00000363602 316 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RNU6-831P-201ENST00000384548 107 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AL592114.1-201ENST00000403842 483 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 SNORA11.1-201ENST00000408133 129 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 PMCHL1-202ENST00000423102 261 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RPS12P10-201ENST00000427031 377 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX1Q92499 RPS3AP52-201ENST00000435639 297 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 SNRPEP4-201ENST00000435815 279 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC007967.1-201ENST00000455422 1159 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RPL36AP13-201ENST00000457490 317 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 RNU6-1208P-201ENST00000459588 107 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 MTND4P17-201ENST00000470444 350 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 EIF4EP3-201ENST00000498782 656 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 HMGB3P15-201ENST00000507326 574 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 CCDC34P1-201ENST00000507441 517 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 Y_RNA.720-201ENST00000517166 92 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.8□□□□□ -1.64
DDX1Q92499 AP000889.1-201ENST00000530968 660 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DDX1Q92499 AC004817.2-201ENST00000561794 651 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 HMGB1P6-201ENST00000569046 646 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 XIAPP1-201ENST00000603162 600 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AL627309.6-201ENST00000606857 840 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC244100.1-202ENST00000621554 382 ntBASIC4.8□□□□□ -1.64
DDX1Q92499 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DDX1Q92499 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
DDX1Q92499 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
DDX1Q92499 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX1Q92499 AP001273.1-201ENST00000624493 3152 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 OR4G1P-203ENST00000641984 1631 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 RNU5E-8P-201ENST00000363502 116 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 SNORA71.2-201ENST00000364941 134 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 U3.15-201ENST00000365398 212 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 Y_RNA.452-201ENST00000384202 108 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DDX1Q92499 RNA5SP372-201ENST00000390836 115 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 RNA5SP44-201ENST00000410446 133 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 RNU4-65P-201ENST00000410473 140 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 RN7SKP159-201ENST00000410657 292 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC009161.1-201ENST00000417306 376 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX1Q92499 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX1Q92499 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 SNORD108-201ENST00000459332 71 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC078785.3-201ENST00000476607 425 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC108022.1-201ENST00000493466 478 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC021146.3-201ENST00000511911 260 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 RNU6-1220P-201ENST00000517126 108 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 SNORA25.17-201ENST00000517184 124 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 AP001781.1-201ENST00000530977 207 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms