Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC068647.1-201ENST00000489539 2265 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 SNORD17-201ENST00000390930 237 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AL359704.1-201ENST00000411586 781 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 USP9YP13-201ENST00000417797 480 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC245291.1-201ENST00000419501 328 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 ST13P14-201ENST00000474095 734 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 RNU2-58P-201ENST00000516403 183 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 Y_RNA.695-201ENST00000516715 107 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AP003122.4-201ENST00000530980 758 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC007458.1-201ENST00000542812 373 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC060771.1-201ENST00000582031 164 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC025594.3-201ENST00000613068 790 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC009509.4-201ENST00000619202 509 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AL603839.4-201ENST00000624658 1005 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1BQ7LBR1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 Y_RNA.436-201ENST00000384097 102 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 RNU6-533P-201ENST00000384144 107 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 RNU6-297P-201ENST00000384636 107 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 MIR490-201ENST00000384865 128 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC012498.1-201ENST00000424037 437 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 CYCSP43-201ENST00000438233 310 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC006028.1-201ENST00000438379 402 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC112653.1-201ENST00000443851 386 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 COX6CP2-201ENST00000444980 225 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AL590365.1-201ENST00000450788 243 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 TPTE2P5-203ENST00000458118 728 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC084357.1-201ENST00000473404 255 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AL358832.1-201ENST00000497800 389 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC010424.1-201ENST00000506336 297 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 FABP5P5-201ENST00000515537 406 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 SNORA64.4-201ENST00000516632 81 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC018630.1-201ENST00000541376 925 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC123904.2-201ENST00000548059 300 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC015917.1-201ENST00000579654 510 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 MIR4276-201ENST00000584832 70 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC083760.1-201ENST00000589621 670 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AP001429.1-201ENST00000602568 530 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AL031176.1-201ENST00000604554 466 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 RN7SKP299-201ENST00000606679 301 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC012360.2-201ENST00000609349 391 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC025048.6-202ENST00000627667 438 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC099654.13-201ENST00000639774 207 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC091152.2-201ENST00000591628 2569 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC138915.3-201ENST00000562908 1389 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 AC032011.1-201ENST00000611703 1549 ntBASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1BQ7LBR1 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms