Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC144NLQ6NUI1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AL139276.1-201ENST00000311910 1001 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 NACAP2-201ENST00000318548 624 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-552P-201ENST00000362869 119 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RNA5SP505-201ENST00000364748 108 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 Y_RNA.303-201ENST00000364998 94 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RNA5SP332-201ENST00000391063 115 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-903P-201ENST00000391270 109 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 MIR1290-201ENST00000408735 78 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AL356387.2-201ENST00000422272 243 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 PDSS1P1-201ENST00000422953 1114 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RPL27AP8-201ENST00000424277 446 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 DNAJC19P7-201ENST00000428811 344 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RPL7P28-201ENST00000437739 740 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AL118520.1-201ENST00000450770 291 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 SNRPGP5-201ENST00000456003 220 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 VN1R17P-201ENST00000472048 1090 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC008897.1-201ENST00000494006 347 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC146944.2-203ENST00000502493 354 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC139495.1-202ENST00000513164 354 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-677P-201ENST00000516914 101 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 SUMO2P20-201ENST00000520803 283 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 TOMM20P2-201ENST00000540082 421 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC060780.3-201ENST00000589464 80 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC091979.2-201ENST00000607514 214 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC006023.2-201ENST00000609916 167 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC012409.3-201ENST00000611343 981 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC012409.4-201ENST00000612923 249 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 AC010338.1-201ENST00000621823 717 ntBASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144NLQ6NUI1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RAD17P1-201ENST00000418130 2042 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNA5SP307-201ENST00000362863 116 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 MIR3065-201ENST00000390137 79 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 SNORD37.1-201ENST00000390968 65 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-817P-201ENST00000391083 104 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-876P-201ENST00000391295 104 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 SNORA74C-2-201ENST00000411179 201 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AC009237.5-201ENST00000414271 501 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RPL7AP25-201ENST00000423357 805 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AL356867.1-201ENST00000429623 299 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 HMGB1P27-201ENST00000431429 603 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AC011753.3-201ENST00000443436 406 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RNU6-953P-201ENST00000459154 107 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 RN7SL810P-201ENST00000493031 276 ntBASIC3.6□□□□□ -1.83
CCDC144NLQ6NUI1 EIF4EP3-201ENST00000498782 656 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms