Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RNU6-45P-201ENST00000384471 107 ntBASIC4.5□□□□□ -1.69
GDNFP39905 Y_RNA.518-201ENST00000384552 113 ntBASIC4.5□□□□□ -1.69
GDNFP39905 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
GDNFP39905 RN7SKP125-201ENST00000410481 302 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 AL133396.1-201ENST00000432048 687 ntBASIC4.5□□□□□ -1.69
GDNFP39905 CEACAMP1-201ENST00000434624 1035 ntBASIC4.5□□□□□ -1.69
GDNFP39905 FCF1P4-201ENST00000448326 183 ntBASIC4.5□□□□□ -1.69
GDNFP39905 RPS3AP46-201ENST00000448352 682 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AL162389.1-201ENST00000449233 177 ntBASIC4.5□□□□□ -1.69
GDNFP39905 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 RNU7-138P-201ENST00000459479 64 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.5□□□□□ -1.69
GDNFP39905 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.5□□□□□ -1.69
GDNFP39905 CBX3P8-201ENST00000532412 525 ntBASIC4.5□□□□□ -1.69
GDNFP39905 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 MIR1273E-201ENST00000581165 102 ntBASIC4.5□□□□□ -1.69
GDNFP39905 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.5□□□□□ -1.69
GDNFP39905 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 FO393422.1-201ENST00000603908 708 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AC010900.2-201ENST00000604508 210 ntBASIC4.5□□□□□ -1.69
GDNFP39905 MIR8069-1-201ENST00000616627 86 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AL159153.1-201ENST00000619688 317 ntBASIC4.5□□□□□ -1.69
GDNFP39905 MIR8069-2-201ENST00000621412 86 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AC132068.1-201ENST00000623805 459 ntBASIC4.5□□□□□ -1.69
GDNFP39905 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.5□□□□□ -1.69
GDNFP39905 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GDNFP39905 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 Y_RNA.20-201ENST00000362479 113 ntBASIC4.49□□□□□ -1.69
GDNFP39905 RNA5SP234-201ENST00000363916 119 ntBASIC4.49□□□□□ -1.69
GDNFP39905 RNU4-50P-201ENST00000364361 141 ntBASIC4.49□□□□□ -1.69
GDNFP39905 Y_RNA.270-201ENST00000364693 104 ntBASIC4.49□□□□□ -1.69
GDNFP39905 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 Y_RNA.416-201ENST00000384014 113 ntBASIC4.49□□□□□ -1.69
GDNFP39905 Y_RNA.539-201ENST00000384635 107 ntBASIC4.49□□□□□ -1.69
GDNFP39905 U3.32-201ENST00000408116 212 ntBASIC4.49□□□□□ -1.69
GDNFP39905 RNU6-174P-201ENST00000410406 106 ntBASIC4.49□□□□□ -1.69
GDNFP39905 RNU2-14P-201ENST00000411053 191 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.49□□□□□ -1.69
GDNFP39905 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.49□□□□□ -1.69
GDNFP39905 RPL30P3-201ENST00000424262 333 ntBASIC4.49□□□□□ -1.69
GDNFP39905 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.49□□□□□ -1.69
GDNFP39905 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.49□□□□□ -1.69
GDNFP39905 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.49□□□□□ -1.69
GDNFP39905 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.49□□□□□ -1.69
GDNFP39905 AC234775.1-201ENST00000454247 670 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AL139109.1-201ENST00000455491 297 ntBASIC4.49□□□□□ -1.69
GDNFP39905 LINC01399-202ENST00000458450 244 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC108161.1-201ENST00000461060 402 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC069499.1-201ENST00000489433 509 ntBASIC4.49□□□□□ -1.69
GDNFP39905 NDUFB5P1-201ENST00000508134 564 ntBASIC4.49□□□□□ -1.69
GDNFP39905 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 RNU6-390P-201ENST00000516259 103 ntBASIC4.49□□□□□ -1.69
GDNFP39905 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC012339.2-201ENST00000523996 453 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AP006587.4-201ENST00000526053 529 ntBASIC4.49□□□□□ -1.69
GDNFP39905 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.49□□□□□ -1.69
GDNFP39905 AC090022.1-201ENST00000546569 311 ntBASIC4.49□□□□□ -1.69
GDNFP39905 CR383656.7-201ENST00000548164 174 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.49□□□□□ -1.69
GDNFP39905 AC130289.1-201ENST00000577321 73 ntBASIC4.49□□□□□ -1.69
GDNFP39905 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 RN7SL708P-201ENST00000580952 299 ntBASIC4.49□□□□□ -1.69
GDNFP39905 VN1R91P-201ENST00000594377 169 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC009779.6-201ENST00000603972 165 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC007619.2-201ENST00000605743 379 ntBASIC4.49□□□□□ -1.69
GDNFP39905 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 AC006329.2-201ENST00000611491 394 ntBASIC4.49□□□□□ -1.69
GDNFP39905 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.49□□□□□ -1.69
GDNFP39905 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.49□□□□□ -1.69
GDNFP39905 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.49□□□□□ -1.69
GDNFP39905 CYP4F35P-202ENST00000636121 390 ntBASIC4.49□□□□□ -1.69
GDNFP39905 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.49□□□□□ -1.69
GDNFP39905 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 AC116667.1-201ENST00000604855 2072 ntBASIC4.49□□□□□ -1.69
GDNFP39905 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GDNFP39905 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
GDNFP39905 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GDNFP39905 AC009951.1-201ENST00000623674 2614 ntBASIC4.48□□□□□ -1.69
GDNFP39905 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms