Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU4-51P-201ENST00000364206 140 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL5A1P20908 U6.112-201ENST00000384129 70 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AP002784.2-201ENST00000397300 549 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC092638.1-201ENST00000411966 1275 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 TAF13P2-201ENST00000416876 286 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC010099.3-201ENST00000423896 409 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.13□□□□□ -2.07
COL5A1P20908 PTGES3P1-201ENST00000439531 483 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC002542.1-201ENST00000440683 193 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.13□□□□□ -2.07
COL5A1P20908 ZNF886P-201ENST00000450781 723 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 CDC42P1-201ENST00000456658 548 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.13□□□□□ -2.07
COL5A1P20908 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 MRPS36P3-201ENST00000519284 130 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.13□□□□□ -2.07
COL5A1P20908 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.13□□□□□ -2.07
COL5A1P20908 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.13□□□□□ -2.07
COL5A1P20908 AC011611.5-201ENST00000552477 578 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 OR4T1P-201ENST00000554933 911 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.13□□□□□ -2.07
COL5A1P20908 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.13□□□□□ -2.07
COL5A1P20908 RN7SL622P-201ENST00000585292 275 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC091057.2-201ENST00000602594 792 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AL035411.2-201ENST00000604022 421 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 Z94722.1-201ENST00000604328 474 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC103710.1-201ENST00000610003 901 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.13□□□□□ -2.07
COL5A1P20908 AL121895.2-201ENST00000619558 447 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 AC104985.3-201ENST00000623479 597 ntBASIC2.13□□□□□ -2.07
COL5A1P20908 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL5A1P20908 SNORD65C-201ENST00000390962 71 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.12□□□□□ -2.07
COL5A1P20908 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC092427.1-202ENST00000430569 476 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC092170.1-201ENST00000440211 356 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC097499.1-201ENST00000444277 208 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 TAF9P1-201ENST00000445421 515 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL589880.1-201ENST00000448271 287 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 MRPL42P4-201ENST00000453267 443 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 TAF9P2-201ENST00000454958 515 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 SNRPGP9-201ENST00000456025 225 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC072039.1-201ENST00000477611 581 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 MTND2P14-201ENST00000482139 351 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 RNA5SP402-201ENST00000517148 110 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC083923.1-201ENST00000523708 376 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 AC124293.1-201ENST00000530034 493 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.12□□□□□ -2.07
COL5A1P20908 MTND3P13-201ENST00000574391 343 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 VN1R87P-201ENST00000596706 487 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC018638.7-201ENST00000605836 1114 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC016877.3-201ENST00000606778 504 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL110115.1-201ENST00000614396 364 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 AL356266.1-201ENST00000623311 483 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COL5A1P20908 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL5A1P20908 MIR21-201ENST00000362134 72 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.12□□□□□ -2.07
COL5A1P20908 RNU4-22P-201ENST00000411058 166 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC010385.1-201ENST00000412374 256 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 AC098826.1-201ENST00000433943 471 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.12□□□□□ -2.07
COL5A1P20908 USP9YP24-201ENST00000434374 697 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 SETP8-201ENST00000435341 628 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 RPL7P54-201ENST00000438336 674 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 USP9YP17-201ENST00000444617 696 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC007677.1-201ENST00000445757 515 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC068135.1-201ENST00000446164 246 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL133217.1-201ENST00000450980 425 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 RPL7P5-201ENST00000471472 736 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC092451.1-201ENST00000480211 153 ntBASIC2.12□□□□□ -2.07
COL5A1P20908 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.12□□□□□ -2.07
COL5A1P20908 TMEM248P1-201ENST00000510579 951 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms