Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SNORA2.3-201ENST00000383920 135 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU2-59P-201ENST00000410482 191 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC245291.1-201ENST00000419501 328 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 BX276092.3-201ENST00000424182 230 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNF2P1-201ENST00000442955 1010 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 VN1R96P-201ENST00000446052 858 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RPS15AP27-201ENST00000449183 343 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RPS29P15-201ENST00000458329 171 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 MTCO1P29-201ENST00000496868 288 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 NPM1P21-201ENST00000513394 762 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC027667.1-201ENST00000545814 304 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 OR4T1P-201ENST00000554933 911 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC010928.3-201ENST00000587712 541 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 WISP1-OT1-201ENST00000602893 642 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC006380.1-201ENST00000603598 186 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC136443.5-201ENST00000603741 370 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC011476.5-201ENST00000615594 130 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 SPATA31D2P-201ENST00000429999 4388 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC008124.1-201ENST00000609803 9730 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AL672167.1-206ENST00000356293 943 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU6-216P-201ENST00000363282 104 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU1-82P-201ENST00000390851 165 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 PEX12P1-201ENST00000400284 1048 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 TMSB4XP8-201ENST00000402089 135 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 TMSB4XP6-201ENST00000415187 135 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 TMSB4XP1-201ENST00000424567 135 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CBWD4P-201ENST00000445695 655 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 MTCO1P42-201ENST00000457379 726 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC010683.1-201ENST00000473673 378 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ENPP7P11-201ENST00000505915 627 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU6-397P-201ENST00000516226 104 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC174048.1-201ENST00000603389 144 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC096720.1-201ENST00000604441 183 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.26-201ENST00000362539 101 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNY3P13-201ENST00000365542 102 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU6-641P-201ENST00000384006 107 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU1-136P-201ENST00000384181 164 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 RNU6-649P-201ENST00000384463 107 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 MIR363-201ENST00000384840 75 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 SNORA48.5-201ENST00000391143 135 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 SNRPFP1-201ENST00000414761 252 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 TIMM9P3-201ENST00000428659 274 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 SKP1P1-201ENST00000438081 489 ntBASIC1.41□□□□□ -2.18
HMCN1Q96RW7 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC1.41□□□□□ -2.18
HMCN1Q96RW7 PRPS1P1-201ENST00000445305 876 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms