Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AC107399.1-201ENST00000451226 265 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.83□□□□□ -1.64
SHDQ96IW2 Y_RNA.635-201ENST00000459041 101 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 Y_RNA.632-201ENST00000459189 102 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 HSPE1P6-201ENST00000479457 291 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 RN7SL558P-201ENST00000497468 299 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 AC090136.1-201ENST00000520009 240 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 HPRT1P3-201ENST00000539521 576 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 ANP32BP3-201ENST00000559213 706 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 MIR3941-201ENST00000582572 103 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 MIR3138-201ENST00000585238 82 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.83□□□□□ -1.64
SHDQ96IW2 IPO5P1-202ENST00000600039 287 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AL161729.3-201ENST00000603533 673 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 ZYXP1-201ENST00000617638 118 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
SHDQ96IW2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHDQ96IW2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHDQ96IW2 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.83□□□□□ -1.64
SHDQ96IW2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.82□□□□□ -1.64
SHDQ96IW2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.82□□□□□ -1.64
SHDQ96IW2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AC074029.4-201ENST00000624796 1859 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 RNU1-94P-201ENST00000362627 173 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 Y_RNA.301-201ENST00000364990 103 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 RNU6-393P-201ENST00000384475 107 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 SNORD70.1-201ENST00000391007 85 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AC079809.1-201ENST00000415468 276 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 EI24P1-201ENST00000416584 867 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AL139095.3-201ENST00000419672 1203 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 MTCO2P27-201ENST00000420740 428 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AL591212.2-201ENST00000433923 257 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AL118496.2-201ENST00000448300 230 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 NUTF2P3-201ENST00000448540 384 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.82□□□□□ -1.64
SHDQ96IW2 RNU7-66P-201ENST00000459469 62 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 RN7SL517P-201ENST00000462240 305 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.82□□□□□ -1.64
SHDQ96IW2 SNORA31.9-201ENST00000516429 84 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 HMGB1P19-201ENST00000517578 577 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AC090151.1-201ENST00000520784 730 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AC022884.2-201ENST00000578535 580 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 DPPA3P3-201ENST00000603842 430 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AP001330.4-201ENST00000604350 154 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AL133255.1-201ENST00000606374 441 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.82□□□□□ -1.64
SHDQ96IW2 MIR92B-201ENST00000607575 96 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AL022401.1-201ENST00000619498 108 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 C2orf27A-204ENST00000623058 969 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AC008785.1-201ENST00000624475 456 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AL133216.2-202ENST00000634512 349 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.82□□□□□ -1.64
SHDQ96IW2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AC125257.1-201ENST00000560400 2930 ntBASIC4.82□□□□□ -1.64
SHDQ96IW2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHDQ96IW2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHDQ96IW2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SHDQ96IW2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SHDQ96IW2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 OR14L1P-202ENST00000641545 3009 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SHDQ96IW2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.81□□□□□ -1.64
SHDQ96IW2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHDQ96IW2 FRG1CP-201ENST00000358464 769 ntBASIC4.81□□□□□ -1.64
SHDQ96IW2 RNA5SP28-201ENST00000363841 119 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms