Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC006006.1-201ENST00000603082 144 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC016925.2-201ENST00000605108 242 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AL031666.3-201ENST00000609320 1006 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 MIR6864-201ENST00000617935 70 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 MIR7154-201ENST00000620673 73 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 7SK.10-201ENST00000621414 298 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC112484.5-201ENST00000624189 228 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 MTND4LP32-201ENST00000636111 270 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 NOL8P1-201ENST00000508336 3529 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXG1P55316 OR4G1P-203ENST00000641984 1631 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC027290.2-201ENST00000623210 18662 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXG1P55316 Z82217.1-201ENST00000625157 8149 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC105074.1-201ENST00000623380 3095 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXG1P55316 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXG1P55316 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
FOXG1P55316 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 AL049780.3-201ENST00000624612 1583 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
FOXG1P55316 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
FOXG1P55316 RNU6-343P-201ENST00000364709 104 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AL356057.3-201ENST00000402607 340 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AL136116.1-201ENST00000403591 381 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 Y_RNA.605-201ENST00000410577 105 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 Y_RNA.615-201ENST00000410769 117 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 HSPE1P12-201ENST00000412576 301 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 SRIP2-201ENST00000428470 166 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXG1P55316 RPL23AP15-201ENST00000450202 459 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 HMGB3P21-201ENST00000452483 547 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 Y_RNA.639-201ENST00000458981 102 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC010301.1-201ENST00000473936 355 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AP000893.1-201ENST00000474462 794 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 PPBPP1-201ENST00000510807 373 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 TTC39CP1-201ENST00000512513 755 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXG1P55316 Y_RNA.711-201ENST00000516993 102 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 SOD1P3-201ENST00000518682 454 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC107934.1-201ENST00000522215 217 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 COX6CP8-201ENST00000522620 226 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC022790.1-201ENST00000522872 204 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC124068.1-201ENST00000563131 678 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXG1P55316 HMGB1P6-201ENST00000569046 646 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.6□□□□□ -1.83
FOXG1P55316 BBIP1P1-201ENST00000602999 279 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC090425.1-201ENST00000610007 140 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC084781.2-201ENST00000615568 161 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 RMST_9.1-201ENST00000619945 193 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC040168.1-201ENST00000623594 991 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 U6.101-201ENST00000637707 76 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
FOXG1P55316 AC006020.1-201ENST00000420179 1854 ntBASIC3.6□□□□□ -1.83
FOXG1P55316 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXG1P55316 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
FOXG1P55316 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 AC068254.2-201ENST00000623938 3577 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
FOXG1P55316 Y_RNA.133-201ENST00000363428 110 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 RNU6-853P-201ENST00000364306 107 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 ENSAP1-201ENST00000392855 326 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXG1P55316 MIR1193-201ENST00000408109 78 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 RNU4-6P-201ENST00000410804 122 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 RNU6-1304P-201ENST00000411374 106 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FOXG1P55316 AC108032.1-201ENST00000416706 207 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 AC113618.1-201ENST00000416747 285 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXG1P55316 RPL30P3-201ENST00000424262 333 ntBASIC3.59□□□□□ -1.83
FOXG1P55316 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXG1P55316 AC119618.1-201ENST00000434191 222 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms