Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RNU6-1303P-201ENST00000364841 107 ntBASIC4.52□□□□□ -1.69
GDNFP39905 RNU6-338P-201ENST00000383888 105 ntBASIC4.52□□□□□ -1.69
GDNFP39905 SNORA51.11-201ENST00000384442 131 ntBASIC4.52□□□□□ -1.69
GDNFP39905 RNA5SP122-201ENST00000384457 108 ntBASIC4.52□□□□□ -1.69
GDNFP39905 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GDNFP39905 RNU4-65P-201ENST00000410473 140 ntBASIC4.52□□□□□ -1.69
GDNFP39905 OR2AT2P-201ENST00000413438 905 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.52□□□□□ -1.69
GDNFP39905 RPL7P2-201ENST00000427639 268 ntBASIC4.52□□□□□ -1.69
GDNFP39905 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.52□□□□□ -1.69
GDNFP39905 AL390119.1-201ENST00000440329 312 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AL161636.2-201ENST00000445179 927 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.52□□□□□ -1.69
GDNFP39905 PCMTD1P1-201ENST00000455560 355 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.52□□□□□ -1.69
GDNFP39905 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.52□□□□□ -1.69
GDNFP39905 TRBVB-201ENST00000477100 408 ntBASIC4.52□□□□□ -1.69
GDNFP39905 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
GDNFP39905 RN7SKP46-201ENST00000515942 234 ntBASIC4.52□□□□□ -1.69
GDNFP39905 RNU6-897P-201ENST00000517135 105 ntBASIC4.52□□□□□ -1.69
GDNFP39905 CDH12P4-201ENST00000517835 295 ntBASIC4.52□□□□□ -1.69
GDNFP39905 CDH12P3-201ENST00000517935 295 ntBASIC4.52□□□□□ -1.69
GDNFP39905 CDH12P1-201ENST00000518435 295 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AP003733.2-201ENST00000529409 171 ntBASIC4.52□□□□□ -1.69
GDNFP39905 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.52□□□□□ -1.69
GDNFP39905 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.52□□□□□ -1.69
GDNFP39905 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.52□□□□□ -1.69
GDNFP39905 AC093227.2-201ENST00000589357 285 ntBASIC4.52□□□□□ -1.69
GDNFP39905 HMGB2P1-201ENST00000591146 634 ntBASIC4.52□□□□□ -1.69
GDNFP39905 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.52□□□□□ -1.69
GDNFP39905 RNA5SP440-201ENST00000612665 119 ntBASIC4.52□□□□□ -1.69
GDNFP39905 FTX_2.1-201ENST00000618816 94 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AC127024.6-201ENST00000621598 424 ntBASIC4.52□□□□□ -1.69
GDNFP39905 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.52□□□□□ -1.69
GDNFP39905 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.52□□□□□ -1.69
GDNFP39905 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
GDNFP39905 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GDNFP39905 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.52□□□□□ -1.69
GDNFP39905 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.52□□□□□ -1.69
GDNFP39905 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.52□□□□□ -1.69
GDNFP39905 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 AC108751.5-201ENST00000492880 1336 ntBASIC4.51□□□□□ -1.69
GDNFP39905 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.51□□□□□ -1.69
GDNFP39905 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.51□□□□□ -1.69
GDNFP39905 RNU6-212P-201ENST00000362642 104 ntBASIC4.51□□□□□ -1.69
GDNFP39905 RNU6-1329P-201ENST00000365664 107 ntBASIC4.51□□□□□ -1.69
GDNFP39905 RNU6-398P-201ENST00000384143 109 ntBASIC4.51□□□□□ -1.69
GDNFP39905 MIR551A-201ENST00000385042 96 ntBASIC4.51□□□□□ -1.69
GDNFP39905 MTCO3P19-201ENST00000415864 321 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.51□□□□□ -1.69
GDNFP39905 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 AL591704.1-201ENST00000432574 275 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.51□□□□□ -1.69
GDNFP39905 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 EEF1A1P1-201ENST00000447052 739 ntBASIC4.51□□□□□ -1.69
GDNFP39905 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 PPIAP19-201ENST00000486414 492 ntBASIC4.51□□□□□ -1.69
GDNFP39905 VN1R105P-201ENST00000486595 910 ntBASIC4.51□□□□□ -1.69
GDNFP39905 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.51□□□□□ -1.69
GDNFP39905 GSTP1P1-201ENST00000548078 319 ntBASIC4.51□□□□□ -1.69
GDNFP39905 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.51□□□□□ -1.69
GDNFP39905 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.51□□□□□ -1.69
GDNFP39905 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.51□□□□□ -1.69
GDNFP39905 OR1F2P-201ENST00000570470 933 ntBASIC4.51□□□□□ -1.69
GDNFP39905 MIR3910-1-201ENST00000580936 111 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 AC064801.1-201ENST00000612025 407 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AC130454.1-201ENST00000622948 401 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AL355480.1-201ENST00000629041 99 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AL137003.2-201ENST00000606924 2538 ntBASIC4.51□□□□□ -1.69
GDNFP39905 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GDNFP39905 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
GDNFP39905 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
GDNFP39905 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GDNFP39905 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 LINC01963-201ENST00000562038 3148 ntBASIC4.5□□□□□ -1.69
GDNFP39905 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
GDNFP39905 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
GDNFP39905 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GDNFP39905 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.5□□□□□ -1.69
GDNFP39905 RN7SKP162-201ENST00000363605 345 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms