Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 SNORA70.16-201ENST00000516390 95 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RNU6-232P-201ENST00000517144 64 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AP001004.1-201ENST00000582468 324 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 BNIP3P22-201ENST00000593399 556 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL360219.1-201ENST00000610230 366 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC092125.1-201ENST00000562568 1995 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBQLN3Q9H347 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
UBQLN3Q9H347 DEFB108F-201ENST00000344638 222 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 BX842559.1-201ENST00000419615 532 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 RPL7P36-201ENST00000444633 681 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 PRSS3P4-201ENST00000453323 162 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 MTND1P9-201ENST00000453775 944 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 RPL7P49-201ENST00000471402 708 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 BZW1P2-201ENST00000473537 826 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 OR2A20P-203ENST00000498397 1268 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC021678.1-201ENST00000505195 936 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC109464.2-201ENST00000510242 943 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 IGHV3-76-201ENST00000522465 295 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 DEFB108D-201ENST00000527787 222 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 BCRP9-201ENST00000605312 388 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC091965.4-201ENST00000607691 587 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC004223.4-201ENST00000612426 332 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AC009268.2-201ENST00000621925 457 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 AP003485.2-201ENST00000623636 610 ntBASIC3.15□□□□□ -1.91
UBQLN3Q9H347 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN3Q9H347 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC011460.1-201ENST00000636268 1834 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 CR383658.2-201ENST00000547576 1525 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNU5E-8P-201ENST00000363502 116 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 Y_RNA.169-201ENST00000363745 96 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 Y_RNA.560-201ENST00000384689 102 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 U8.14-201ENST00000390843 143 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNU4-72P-201ENST00000410754 173 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC092447.3-201ENST00000426027 686 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RPS6P15-201ENST00000431996 751 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC005019.1-201ENST00000436455 431 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL590664.1-201ENST00000448065 339 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC098826.2-201ENST00000452011 651 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC093663.1-201ENST00000497190 394 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC010486.2-201ENST00000505572 483 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC116347.2-201ENST00000514912 523 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 RNU6-759P-201ENST00000516740 103 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 HMGN1P28-201ENST00000521340 364 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms