Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 DOCK11P1-201ENST00000553480 5932 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU1-5P-201ENST00000362684 144 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 Y_RNA.101-201ENST00000363154 102 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNA5SP435-201ENST00000364044 108 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU1-55P-201ENST00000365510 158 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 SNORA22-201ENST00000383907 134 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-147P-201ENST00000383983 107 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-1074P-201ENST00000383995 104 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 SNORA70E-201ENST00000384492 135 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RPL17P36-201ENST00000420302 549 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC010095.1-201ENST00000443543 144 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-625P-201ENST00000459412 107 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-589P-201ENST00000516485 107 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 SNRPCP6-201ENST00000528310 210 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC090049.2-201ENST00000550377 109 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AL121603.1-201ENST00000553815 142 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC090877.1-201ENST00000561418 344 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 ZNF192P1-203ENST00000565888 810 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 DEFB117-201ENST00000602356 141 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AL590032.1-201ENST00000604920 252 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AC010999.1-201ENST00000611856 324 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 uc_338.29-201ENST00000615099 168 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AL354798.1-201ENST00000622505 329 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 SNORA16A-202ENST00000628458 135 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EFCAB3Q8N7B9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 BIN2P1-201ENST00000504996 1530 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 SNORA70H-201ENST00000383910 135 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 SNORA70J-201ENST00000384182 135 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RNA5SP474-201ENST00000391234 90 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MIR1275-201ENST00000408770 80 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-1245P-201ENST00000411130 106 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RPS12P23-201ENST00000419579 400 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 BPY2DP-201ENST00000422208 265 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AL589765.3-201ENST00000446084 462 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RPL7AP71-201ENST00000451120 739 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RPL21P126-201ENST00000470049 478 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RNU5E-3P-201ENST00000515913 68 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 RNU6-155P-201ENST00000516347 100 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 SCARNA15.2-201ENST00000516409 127 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AC021269.2-201ENST00000532318 330 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 MIR4433B-201ENST00000581329 102 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AC024153.1-201ENST00000603103 365 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC6.4□□□□□ -1.38
EFCAB3Q8N7B9 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
EFCAB3Q8N7B9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.39□□□□□ -1.39
EFCAB3Q8N7B9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
EFCAB3Q8N7B9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
EFCAB3Q8N7B9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms