Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 OR5J1P-201ENST00000313544 939 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-343P-201ENST00000364709 104 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-769P-201ENST00000384407 104 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RPS6P12-201ENST00000432491 726 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 CKS1BP5-201ENST00000434172 273 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RPL23AP33-201ENST00000442301 452 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RPL7P36-201ENST00000444633 681 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC079140.3-201ENST00000511111 550 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNA5SP356-201ENST00000515972 94 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC006504.1-201ENST00000562493 3666 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 MIR3945-201ENST00000581853 98 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 TPMTP1-201ENST00000592307 737 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 U73479.1-201ENST00000618062 168 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC022149.2-201ENST00000621061 203 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC090229.1-201ENST00000590983 1609 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-283P-201ENST00000364788 107 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-533P-201ENST00000384144 107 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-339P-201ENST00000384310 107 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 MIR93-201ENST00000385024 80 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AL356421.1-201ENST00000403255 413 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 CDK8P2-201ENST00000415020 547 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC005517.2-201ENST00000424673 553 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC007742.1-201ENST00000425789 329 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 ELOCP26-201ENST00000436067 329 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 GDI2P2-201ENST00000445131 608 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AP000542.1-201ENST00000448473 371 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RPL29P29-201ENST00000448725 423 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 USP9YP12-201ENST00000450481 570 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 SNRPFP4-201ENST00000456366 242 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 snoU13.8-201ENST00000458890 104 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RPL21P103-201ENST00000479921 488 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC034222.1-201ENST00000494052 532 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 VN1R104P-201ENST00000505115 1009 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 TXNP6-201ENST00000510190 310 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 FABP5P5-201ENST00000515537 406 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 RNA5SP154-201ENST00000516193 111 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 SNORA70.19-201ENST00000516717 90 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC009812.2-201ENST00000517657 457 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AP002963.1-201ENST00000530590 184 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AGGF1P4-201ENST00000568249 801 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 SEPT7P9-203ENST00000604116 343 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AC100793.4-201ENST00000613683 429 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 AL139811.1-201ENST00000424779 2299 ntBASIC4.41□□□□□ -1.7
KRT28Q7Z3Y7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT28Q7Z3Y7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.4□□□□□ -1.7
KRT28Q7Z3Y7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
KRT28Q7Z3Y7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-356P-201ENST00000384140 107 ntBASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 SNORA54-201ENST00000384281 123 ntBASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 Y_RNA.505-201ENST00000384489 102 ntBASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 HMGN2P8-201ENST00000391458 268 ntBASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 DEFB108C-201ENST00000400154 252 ntBASIC4.4□□□□□ -1.71
KRT28Q7Z3Y7 RN7SKP56-201ENST00000410513 331 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms