Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC123767.1-202ENST00000620407 817 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AP003485.1-201ENST00000625093 753 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC099654.9-201ENST00000637055 678 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
CTDNEP1O95476 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CTDNEP1O95476 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTDNEP1O95476 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTDNEP1O95476 ANKRD36P1-201ENST00000344424 659 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTDNEP1O95476 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 SNORA36C-201ENST00000384289 132 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 Y_RNA.472-201ENST00000384322 102 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 RNU6-921P-201ENST00000384361 107 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 RNU6-441P-201ENST00000384545 106 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 VN1R51P-201ENST00000411675 945 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 AL136133.1-201ENST00000413694 376 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 RAC1P8-201ENST00000427086 527 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC006548.1-201ENST00000427470 102 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC004854.1-201ENST00000440356 349 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 RABEPKP1-201ENST00000440529 1026 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 snoU109.3-201ENST00000459477 145 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC114781.4-201ENST00000513707 639 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 RNA5SP135-201ENST00000517019 125 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC022690.1-201ENST00000526681 550 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AP000889.2-201ENST00000532684 490 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AADACP1-206ENST00000561502 1193 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 SNORD39.3-201ENST00000584451 71 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC091057.2-201ENST00000602594 792 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 RPL12P50-201ENST00000603116 116 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AL592148.2-201ENST00000612210 372 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 CR381572.1-201ENST00000625098 102 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 AC233263.6-201ENST00000631132 1963 ntBASIC2.66□□□□□ -1.98
CTDNEP1O95476 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDNEP1O95476 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
CTDNEP1O95476 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.65□□□□□ -1.98
CTDNEP1O95476 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 RNU6-1027P-201ENST00000383998 107 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 Y_RNA.578-201ENST00000390903 88 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 MIR1289-1-201ENST00000408836 144 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 SSXP9-201ENST00000417503 292 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC233981.1-201ENST00000423224 461 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC114973.1-201ENST00000429057 632 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 OR10R1P-201ENST00000441524 1141 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 EXOSC3P1-201ENST00000448649 500 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 AL009048.1-201ENST00000450437 298 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 RPL31P50-201ENST00000471002 296 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 XKRY-201ENST00000510392 1100 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC009220.3-201ENST00000604318 586 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CTDNEP1O95476 AC004696.1-201ENST00000614345 607 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 MFSD8-245ENST00000641743 948 ntBASIC2.65□□□□□ -1.99
CTDNEP1O95476 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.65□□□□□ -1.99
CTDNEP1O95476 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 RNA5SP258-201ENST00000362750 119 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 RNU4-51P-201ENST00000364206 140 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 RNU6-224P-201ENST00000384055 107 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 RNU6-339P-201ENST00000384310 107 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 HMGB1P11-201ENST00000413899 637 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 BOLA3P4-201ENST00000418151 400 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC005345.1-201ENST00000431868 217 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms