Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP003122.4-201ENST00000530980 758 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 PTP4A1P6-201ENST00000531034 478 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC022080.3-201ENST00000544433 482 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AL391840.1-201ENST00000571144 367 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC067852.4-201ENST00000590314 478 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 DUXAP4-201ENST00000603046 613 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AL355812.1-201ENST00000603215 216 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AP003355.3-201ENST00000623465 114 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 ZNF33CP-201ENST00000432492 2030 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 FTLP6-201ENST00000355274 422 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 U8.3-201ENST00000363321 132 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 Y_RNA.296-201ENST00000364930 108 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 RNU6-359P-201ENST00000365466 108 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 HMGN1P24-201ENST00000412282 298 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 MTND1P23-201ENST00000416931 372 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AL353777.1-201ENST00000425552 326 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 USP9YP18-201ENST00000425912 695 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 EZH2P1-201ENST00000431167 291 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 FGF7P6-202ENST00000451282 293 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 OR5H5P-201ENST00000503164 928 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 RNU2-46P-201ENST00000517038 113 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC124947.2-202ENST00000552735 133 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 SETP2-201ENST00000553886 926 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.23□□□□□ -1.57
RAPGEF3O95398 HMGN1P30-201ENST00000589286 268 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 YWHAQP7-201ENST00000603536 658 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 OR10AB1P-201ENST00000609613 938 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC090517.2-201ENST00000614966 680 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AP006248.2-201ENST00000623309 592 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 CR381653.2-201ENST00000624041 768 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 AC110994.2-201ENST00000635481 492 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 AL139811.1-201ENST00000424779 2299 ntBASIC5.23□□□□□ -1.57
RAPGEF3O95398 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAPGEF3O95398 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAPGEF3O95398 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAPGEF3O95398 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAPGEF3O95398 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAPGEF3O95398 RNY4P34-201ENST00000364779 95 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 MIR548F1-201ENST00000408667 84 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 AL359704.1-201ENST00000411586 781 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 PIGFP2-201ENST00000421400 651 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 ARPC3P1-201ENST00000437218 533 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC108734.1-201ENST00000439549 399 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 AL162388.1-201ENST00000450912 352 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 MTND1P3-201ENST00000484956 952 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC108078.1-201ENST00000508073 725 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 RNU6-314P-201ENST00000516574 104 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 SUMO2P20-201ENST00000520803 283 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC009101.1-201ENST00000568135 242 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC124864.2-201ENST00000624736 186 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 AC010149.2-201ENST00000637608 315 ntBASIC5.22□□□□□ -1.57
RAPGEF3O95398 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAPGEF3O95398 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 Y_RNA.234-201ENST00000364409 97 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL138885.1-201ENST00000405921 675 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 GSTA9P-201ENST00000406231 611 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms