Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 AC013476.2-201ENST00000614456 459 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC138932.5-201ENST00000617759 563 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AL136313.1-201ENST00000624804 202 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 PRO1804-201ENST00000623780 2050 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 Y_RNA.559-201ENST00000384686 107 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NKX2-2O95096 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 RPL7P60-201ENST00000397636 735 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 TXNP7-201ENST00000406296 293 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 MIR1290-201ENST00000408735 78 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.44□□□□□ -1.86
NKX2-2O95096 RN7SKP156-201ENST00000410308 342 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-2O95096 RAC1P3-201ENST00000416129 580 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AL139247.1-201ENST00000422768 325 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC008850.1-201ENST00000427546 362 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 NANOGP10-201ENST00000453325 895 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 HMGN2P7-201ENST00000456186 273 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 TPT1P7-201ENST00000458300 517 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AC068587.1-201ENST00000483613 781 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AC091435.1-201ENST00000505442 584 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 FAM60DP-201ENST00000524174 632 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AC123904.3-201ENST00000547218 814 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 SYF2P1-201ENST00000550658 413 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AP005205.1-201ENST00000563503 508 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC055876.1-202ENST00000567053 138 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AC137800.2-201ENST00000574375 120 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AF038458.1-201ENST00000588406 262 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 VN1R85P-201ENST00000601587 426 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 SNHG22-203ENST00000617833 660 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC139792.2-201ENST00000624218 587 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 AC244205.2-202ENST00000635781 342 ntBASIC3.44□□□□□ -1.86
NKX2-2O95096 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-2O95096 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-2O95096 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-2O95096 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 FAM35DP-201ENST00000323387 2712 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC002546.1-201ENST00000588041 2504 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-2O95096 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-2O95096 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NKX2-2O95096 OR1S2-201ENST00000302592 978 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RNU6-511P-201ENST00000363496 107 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RN7SKP280-201ENST00000364196 304 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RNY4P34-201ENST00000364779 95 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 MIR514A1-201ENST00000385133 98 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RPL32P23-201ENST00000397237 405 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AL359634.1-202ENST00000404721 284 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 HMGB3P20-201ENST00000417997 600 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 C1DP2-201ENST00000418167 426 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 RPS15AP12-201ENST00000419498 388 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 YPEL5P1-201ENST00000419731 367 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 USP12PX-201ENST00000432383 1057 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 MTCO3P5-201ENST00000433620 714 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 NDUFB1P1-201ENST00000435191 180 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.43□□□□□ -1.86
NKX2-2O95096 RPS24P1-201ENST00000438550 371 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC073614.1-201ENST00000438690 650 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 USP9YP15-201ENST00000442391 422 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX2-2O95096 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX2-2O95096 GAPDHP27-201ENST00000447427 1020 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 KLF3P2-201ENST00000465138 268 ntBASIC3.43□□□□□ -1.86
NKX2-2O95096 SNRPGP3-201ENST00000469405 227 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms