Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC106900.2-201ENST00000604994 317 ntBASIC2.95□□□□□ -1.94
MSH4O15457 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.95□□□□□ -1.94
MSH4O15457 AC099654.9-201ENST00000637055 678 ntBASIC2.95□□□□□ -1.94
MSH4O15457 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.95□□□□□ -1.94
MSH4O15457 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.94□□□□□ -1.94
MSH4O15457 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AC097714.1-201ENST00000511272 1647 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
MSH4O15457 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MSH4O15457 AL139039.1-201ENST00000401900 692 ntBASIC2.94□□□□□ -1.94
MSH4O15457 RPS4XP8-201ENST00000402039 771 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AL031121.1-201ENST00000406553 254 ntBASIC2.94□□□□□ -1.94
MSH4O15457 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
MSH4O15457 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.94□□□□□ -1.94
MSH4O15457 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
MSH4O15457 AC004866.2-201ENST00000438285 481 ntBASIC2.94□□□□□ -1.94
MSH4O15457 HIGD1AP11-201ENST00000438361 280 ntBASIC2.94□□□□□ -1.94
MSH4O15457 MTCYBP34-201ENST00000439552 670 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AL645638.1-201ENST00000440519 361 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AC011816.1-201ENST00000441346 546 ntBASIC2.94□□□□□ -1.94
MSH4O15457 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
MSH4O15457 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 CACYBPP2-201ENST00000453625 678 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AC104164.3-201ENST00000467363 1258 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
MSH4O15457 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.94□□□□□ -1.94
MSH4O15457 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.94□□□□□ -1.94
MSH4O15457 CBX3P3-201ENST00000508108 532 ntBASIC2.94□□□□□ -1.94
MSH4O15457 OR10V3P-201ENST00000525712 725 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 AC243972.3-201ENST00000539655 198 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 MED28P6-201ENST00000558776 231 ntBASIC2.94□□□□□ -1.94
MSH4O15457 MIR4513-201ENST00000581077 86 ntBASIC2.94□□□□□ -1.94
MSH4O15457 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 AC016877.3-201ENST00000606778 504 ntBASIC2.94□□□□□ -1.94
MSH4O15457 AP000526.1-201ENST00000603308 1388 ntBASIC2.94□□□□□ -1.94
MSH4O15457 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH4O15457 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH4O15457 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 RNU6-882P-201ENST00000391025 103 ntBASIC2.93□□□□□ -1.94
MSH4O15457 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 RPS15AP38-201ENST00000413110 372 ntBASIC2.93□□□□□ -1.94
MSH4O15457 SSXP9-201ENST00000417503 292 ntBASIC2.93□□□□□ -1.94
MSH4O15457 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
MSH4O15457 RPL21P32-201ENST00000419877 477 ntBASIC2.93□□□□□ -1.94
MSH4O15457 DPPA2P1-201ENST00000428060 556 ntBASIC2.93□□□□□ -1.94
MSH4O15457 EEF1A1P39-201ENST00000440791 250 ntBASIC2.93□□□□□ -1.94
MSH4O15457 RPL17P49-201ENST00000443728 411 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 MTCO2P25-201ENST00000447065 681 ntBASIC2.93□□□□□ -1.94
MSH4O15457 EXOSC3P1-201ENST00000448649 500 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AC104308.1-201ENST00000454621 333 ntBASIC2.93□□□□□ -1.94
MSH4O15457 RPL18AP17-201ENST00000455326 198 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH4O15457 RPS3P1-201ENST00000456781 192 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AC108860.1-201ENST00000484521 383 ntBASIC2.93□□□□□ -1.94
MSH4O15457 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.93□□□□□ -1.94
MSH4O15457 XKRY-201ENST00000510392 1100 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH4O15457 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH4O15457 BNIP3P26-201ENST00000600827 554 ntBASIC2.93□□□□□ -1.94
MSH4O15457 NRBF2P5-201ENST00000603087 788 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AL139022.2-201ENST00000606934 443 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AL391834.2-201ENST00000609982 546 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AC068831.7-201ENST00000616954 363 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AC022306.3-201ENST00000619930 550 ntBASIC2.93□□□□□ -1.94
MSH4O15457 AC092608.2-201ENST00000624427 218 ntBASIC2.93□□□□□ -1.94
MSH4O15457 CRYM-AS1-204ENST00000637983 556 ntBASIC2.93□□□□□ -1.94
MSH4O15457 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH4O15457 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH4O15457 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH4O15457 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSH4O15457 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MSH4O15457 AL136360.1-201ENST00000503377 1900 ntBASIC2.92□□□□□ -1.94
MSH4O15457 FTLP6-201ENST00000355274 422 ntBASIC2.92□□□□□ -1.94
MSH4O15457 SNORD62.1-201ENST00000362541 86 ntBASIC2.92□□□□□ -1.94
MSH4O15457 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
MSH4O15457 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MSH4O15457 AL356131.1-201ENST00000405826 414 ntBASIC2.92□□□□□ -1.94
MSH4O15457 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 MTATP6P20-201ENST00000414147 562 ntBASIC2.92□□□□□ -1.94
MSH4O15457 RPS3AP37-201ENST00000419176 745 ntBASIC2.92□□□□□ -1.94
MSH4O15457 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.92□□□□□ -1.94
MSH4O15457 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH4O15457 MTND4P6-201ENST00000438297 472 ntBASIC2.92□□□□□ -1.94
MSH4O15457 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH4O15457 RAC1P7-201ENST00000445367 377 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC007327.1-201ENST00000447461 264 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AL353691.1-201ENST00000451332 387 ntBASIC2.92□□□□□ -1.94
MSH4O15457 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 RPL31P50-201ENST00000471002 296 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms