Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC110801.1-201ENST00000623590 212 ntBASIC4.55□□□□□ -1.68
FOXN1O15353 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN1O15353 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FOXN1O15353 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN1O15353 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN1O15353 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN1O15353 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN1O15353 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN1O15353 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
FOXN1O15353 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 AC010329.2-201ENST00000595195 2737 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FOXN1O15353 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 FTLP6-201ENST00000355274 422 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 Y_RNA.72-201ENST00000362894 103 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 RNU6-492P-201ENST00000363035 104 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 U8.3-201ENST00000363321 132 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 Y_RNA.132-201ENST00000363421 102 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FOXN1O15353 RNU6-908P-201ENST00000410160 94 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN1O15353 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 AC083875.1-201ENST00000419509 405 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 SDCBPP2-201ENST00000424643 885 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AL353729.1-201ENST00000425044 720 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 HMGB3P9-201ENST00000441799 583 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN1O15353 ARPC3P5-201ENST00000448802 534 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 C1DP4-201ENST00000455429 424 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 RPS20P20-201ENST00000460498 340 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC007182.2-201ENST00000489251 402 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.54□□□□□ -1.68
FOXN1O15353 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 CYCSP2-201ENST00000558168 301 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC022968.1-201ENST00000567372 442 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 BNIP3P23-201ENST00000599655 511 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC012507.3-201ENST00000603556 477 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC006023.1-201ENST00000603944 259 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AC112187.2-201ENST00000604345 283 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AL451044.1-201ENST00000604867 238 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AP004247.3-201ENST00000608682 624 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN1O15353 AC009268.2-201ENST00000621925 457 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 AL158801.5-201ENST00000623123 465 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 PISRT1-201ENST00000626175 531 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 ZNF826P-207ENST00000622273 1910 ntBASIC4.54□□□□□ -1.68
FOXN1O15353 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FOXN1O15353 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN1O15353 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXN1O15353 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXN1O15353 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN1O15353 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN1O15353 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXN1O15353 AC092079.1-201ENST00000558620 1985 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN1O15353 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN1O15353 SNORD116-23-201ENST00000384645 92 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 Y_RNA.608-201ENST00000410647 95 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 RN7SKP247-201ENST00000411094 308 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AL359704.1-201ENST00000411586 781 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXN1O15353 PIGFP2-201ENST00000421400 651 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AL035410.1-201ENST00000427409 427 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXN1O15353 CALM1P1-201ENST00000442082 433 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXN1O15353 RPL7P59-201ENST00000447700 943 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 RPS3AP46-201ENST00000448352 682 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC140076.1-201ENST00000449897 361 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC022431.1-201ENST00000450941 438 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXN1O15353 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXN1O15353 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXN1O15353 RPS27AP18-201ENST00000515536 459 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 RNU2-46P-201ENST00000517038 113 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 HSPA8P13-201ENST00000523715 472 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.53□□□□□ -1.68
FOXN1O15353 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXN1O15353 AC022884.3-201ENST00000579571 248 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 VN1R80P-201ENST00000597126 338 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AL133255.1-201ENST00000606374 441 ntBASIC4.53□□□□□ -1.68
FOXN1O15353 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.53□□□□□ -1.68
FOXN1O15353 AC097468.3-201ENST00000607956 456 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms